Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10920 and AO353_10925 are separated by 60 nucleotides AO353_10925 and AO353_10930 are separated by 74 nucleotides
AO353_10920: AO353_10920 - homoserine kinase, at 2,383,562 to 2,384,512
_10920
AO353_10925: AO353_10925 - hypothetical protein, at 2,384,573 to 2,384,863
_10925
AO353_10930: AO353_10930 - DNA polymerase I, at 2,384,938 to 2,387,709
_10930
Position (kb)
2384
2385 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2383.855 kb on - strand, within AO353_10920 at 2383.881 kb on + strand, within AO353_10920 at 2384.560 kb on + strand at 2384.561 kb on - strand at 2384.566 kb on + strand at 2384.567 kb on - strand at 2384.567 kb on - strand at 2384.574 kb on + strand at 2384.574 kb on + strand at 2384.574 kb on + strand at 2384.574 kb on + strand at 2384.574 kb on + strand at 2384.575 kb on - strand at 2384.575 kb on - strand at 2384.575 kb on - strand at 2384.584 kb on + strand at 2384.585 kb on - strand at 2384.611 kb on + strand, within AO353_10925 at 2384.611 kb on + strand, within AO353_10925 at 2384.611 kb on + strand, within AO353_10925 at 2384.612 kb on - strand, within AO353_10925 at 2384.612 kb on - strand, within AO353_10925 at 2384.633 kb on - strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.661 kb on - strand, within AO353_10925 at 2384.706 kb on + strand, within AO353_10925 at 2384.707 kb on - strand, within AO353_10925 at 2384.707 kb on - strand, within AO353_10925 at 2384.841 kb on - strand at 2384.866 kb on + strand at 2384.866 kb on + strand at 2384.867 kb on - strand at 2384.867 kb on - strand at 2384.903 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 2,383,855 - AO353_10920 0.31 -1.1 2,383,881 + AO353_10920 0.34 -1.5 2,384,560 + +1.1 2,384,561 - -2.3 2,384,566 + +0.5 2,384,567 - -1.5 2,384,567 - +0.4 2,384,574 + +1.8 2,384,574 + +2.3 2,384,574 + +2.3 2,384,574 + +3.2 2,384,574 + +3.1 2,384,575 - -0.1 2,384,575 - +2.1 2,384,575 - +2.4 2,384,584 + +2.7 2,384,585 - +0.6 2,384,611 + AO353_10925 0.13 +2.0 2,384,611 + AO353_10925 0.13 +2.1 2,384,611 + AO353_10925 0.13 +1.2 2,384,612 - AO353_10925 0.13 -1.1 2,384,612 - AO353_10925 0.13 -0.5 2,384,633 - AO353_10925 0.21 +2.2 2,384,634 + AO353_10925 0.21 +2.1 2,384,634 + AO353_10925 0.21 +1.2 2,384,634 + AO353_10925 0.21 -1.1 2,384,634 + AO353_10925 0.21 +2.1 2,384,634 + AO353_10925 0.21 +1.2 2,384,634 + AO353_10925 0.21 +1.3 2,384,634 + AO353_10925 0.21 +0.5 2,384,634 + AO353_10925 0.21 +1.5 2,384,634 + AO353_10925 0.21 +2.7 2,384,634 + AO353_10925 0.21 +0.8 2,384,634 + AO353_10925 0.21 +2.5 2,384,634 + AO353_10925 0.21 -1.1 2,384,634 + AO353_10925 0.21 +2.0 2,384,634 + AO353_10925 0.21 +0.9 2,384,634 + AO353_10925 0.21 +2.2 2,384,634 + AO353_10925 0.21 -1.8 2,384,634 + AO353_10925 0.21 +2.3 2,384,634 + AO353_10925 0.21 +0.5 2,384,634 + AO353_10925 0.21 -0.8 2,384,635 - AO353_10925 0.21 +1.1 2,384,635 - AO353_10925 0.21 -0.5 2,384,635 - AO353_10925 0.21 -0.5 2,384,635 - AO353_10925 0.21 -0.6 2,384,635 - AO353_10925 0.21 -0.1 2,384,635 - AO353_10925 0.21 +2.1 2,384,635 - AO353_10925 0.21 -0.5 2,384,635 - AO353_10925 0.21 -2.5 2,384,635 - AO353_10925 0.21 +4.9 2,384,635 - AO353_10925 0.21 +1.2 2,384,635 - AO353_10925 0.21 -0.5 2,384,635 - AO353_10925 0.21 +1.1 2,384,635 - AO353_10925 0.21 -1.5 2,384,635 - AO353_10925 0.21 -0.5 2,384,635 - AO353_10925 0.21 +0.8 2,384,635 - +0.5 2,384,635 - AO353_10925 0.21 -2.8 2,384,635 - AO353_10925 0.21 -0.0 2,384,635 - AO353_10925 0.21 -1.1 2,384,635 - AO353_10925 0.21 +3.5 2,384,635 - AO353_10925 0.21 -0.5 2,384,635 - AO353_10925 0.21 -1.5 2,384,635 - AO353_10925 0.21 +0.5 2,384,635 - AO353_10925 0.21 -2.3 2,384,661 - AO353_10925 0.30 -0.1 2,384,706 + AO353_10925 0.46 +0.1 2,384,707 - AO353_10925 0.46 -2.5 2,384,707 - AO353_10925 0.46 -1.1 2,384,841 - +1.5 2,384,866 + -1.3 2,384,866 + -0.3 2,384,867 - -1.3 2,384,867 - -3.0 2,384,903 + +0.5
Or see this region's nucleotide sequence