Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10580 and AO353_10585 are separated by 365 nucleotides AO353_10585 and AO353_10590 are separated by 63 nucleotides AO353_10590 and AO353_10595 are separated by 10 nucleotides
AO353_10580: AO353_10580 - ATPase, at 2,319,741 to 2,322,047
_10580
AO353_10585: AO353_10585 - glycerol acyltransferase, at 2,322,413 to 2,323,183
_10585
AO353_10590: AO353_10590 - histidinol phosphatase, at 2,323,247 to 2,323,780
_10590
AO353_10595: AO353_10595 - glycine--tRNA ligase subunit beta, at 2,323,791 to 2,325,845
_10595
Position (kb)
2322
2323
2324 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2321.466 kb on + strand, within AO353_10580 at 2321.466 kb on + strand, within AO353_10580 at 2321.466 kb on + strand, within AO353_10580 at 2321.518 kb on + strand, within AO353_10580 at 2321.518 kb on + strand, within AO353_10580 at 2321.518 kb on + strand, within AO353_10580 at 2321.518 kb on + strand, within AO353_10580 at 2321.518 kb on + strand, within AO353_10580 at 2321.519 kb on - strand, within AO353_10580 at 2321.519 kb on - strand, within AO353_10580 at 2321.519 kb on - strand, within AO353_10580 at 2321.519 kb on - strand, within AO353_10580 at 2321.581 kb on - strand, within AO353_10580 at 2321.581 kb on - strand, within AO353_10580 at 2321.642 kb on + strand, within AO353_10580 at 2321.643 kb on - strand, within AO353_10580 at 2321.766 kb on + strand, within AO353_10580 at 2321.766 kb on + strand, within AO353_10580 at 2321.766 kb on + strand, within AO353_10580 at 2321.767 kb on - strand, within AO353_10580 at 2321.767 kb on - strand, within AO353_10580 at 2321.767 kb on - strand, within AO353_10580 at 2321.767 kb on - strand, within AO353_10580 at 2321.767 kb on - strand, within AO353_10580 at 2321.852 kb on + strand at 2321.852 kb on + strand at 2321.852 kb on + strand at 2321.853 kb on - strand at 2321.853 kb on - strand at 2321.853 kb on - strand at 2321.853 kb on - strand at 2321.853 kb on - strand at 2321.853 kb on - strand at 2321.853 kb on - strand at 2321.869 kb on + strand at 2322.008 kb on + strand at 2322.008 kb on + strand at 2322.009 kb on - strand at 2322.109 kb on + strand at 2322.109 kb on + strand at 2322.110 kb on - strand at 2322.110 kb on - strand at 2322.145 kb on + strand at 2322.145 kb on + strand at 2322.145 kb on + strand at 2322.145 kb on + strand at 2322.145 kb on + strand at 2322.145 kb on + strand at 2322.146 kb on - strand at 2322.146 kb on - strand at 2322.253 kb on + strand at 2322.253 kb on + strand at 2322.253 kb on + strand at 2322.254 kb on - strand at 2322.271 kb on + strand at 2322.300 kb on + strand at 2322.344 kb on + strand at 2322.391 kb on + strand at 2323.198 kb on - strand at 2323.198 kb on - strand at 2323.201 kb on - strand at 2323.201 kb on - strand at 2323.201 kb on - strand at 2323.201 kb on - strand at 2323.249 kb on - strand at 2323.259 kb on - strand at 2323.259 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 2,321,466 + AO353_10580 0.75 -1.5 2,321,466 + AO353_10580 0.75 +0.6 2,321,466 + AO353_10580 0.75 +0.5 2,321,518 + AO353_10580 0.77 -2.1 2,321,518 + AO353_10580 0.77 +1.8 2,321,518 + AO353_10580 0.77 -1.1 2,321,518 + AO353_10580 0.77 +3.7 2,321,518 + AO353_10580 0.77 -1.5 2,321,519 - AO353_10580 0.77 +1.1 2,321,519 - AO353_10580 0.77 -1.1 2,321,519 - AO353_10580 0.77 -1.9 2,321,519 - AO353_10580 0.77 +0.2 2,321,581 - AO353_10580 0.80 -2.0 2,321,581 - AO353_10580 0.80 -1.1 2,321,642 + AO353_10580 0.82 -1.3 2,321,643 - AO353_10580 0.82 -0.5 2,321,766 + AO353_10580 0.88 -0.9 2,321,766 + AO353_10580 0.88 +0.8 2,321,766 + AO353_10580 0.88 -1.7 2,321,767 - AO353_10580 0.88 +1.9 2,321,767 - AO353_10580 0.88 -1.0 2,321,767 - AO353_10580 0.88 +0.5 2,321,767 - AO353_10580 0.88 +0.1 2,321,767 - AO353_10580 0.88 +0.5 2,321,852 + +0.3 2,321,852 + +1.7 2,321,852 + -0.5 2,321,853 - +0.9 2,321,853 - +0.5 2,321,853 - -1.5 2,321,853 - +1.0 2,321,853 - -0.5 2,321,853 - -1.1 2,321,853 - -1.3 2,321,869 + -2.3 2,322,008 + +1.7 2,322,008 + +0.5 2,322,009 - -1.5 2,322,109 + -1.9 2,322,109 + -1.5 2,322,110 - +2.9 2,322,110 - -1.3 2,322,145 + +1.6 2,322,145 + -1.1 2,322,145 + -0.5 2,322,145 + -0.5 2,322,145 + -0.5 2,322,145 + -2.3 2,322,146 - -2.1 2,322,146 - -0.5 2,322,253 + -0.5 2,322,253 + -2.5 2,322,253 + -2.3 2,322,254 - -1.1 2,322,271 + +1.7 2,322,300 + +0.5 2,322,344 + -0.9 2,322,391 + -0.9 2,323,198 - -1.1 2,323,198 - -1.5 2,323,201 - -0.8 2,323,201 - +1.7 2,323,201 - -1.1 2,323,201 - -2.5 2,323,249 - +0.5 2,323,259 - -0.3 2,323,259 - +0.7
Or see this region's nucleotide sequence