Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09260 and AO353_09265 are separated by 270 nucleotides AO353_09265 and AO353_09270 are separated by 12 nucleotides AO353_09270 and AO353_09275 are separated by 168 nucleotides
AO353_09260: AO353_09260 - ribonuclease PH, at 2,031,442 to 2,032,164
_09260
AO353_09265: AO353_09265 - hypothetical protein, at 2,032,435 to 2,033,298
_09265
AO353_09270: AO353_09270 - guanylate kinase, at 2,033,311 to 2,033,931
_09270
AO353_09275: AO353_09275 - DNA-directed RNA polymerase subunit omega, at 2,034,100 to 2,034,363
_09275
Position (kb)
2032
2033
2034 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2031.477 kb on + strand at 2031.477 kb on + strand at 2031.477 kb on + strand at 2031.478 kb on - strand at 2031.478 kb on - strand at 2031.478 kb on - strand at 2031.629 kb on + strand, within AO353_09260 at 2031.630 kb on - strand, within AO353_09260 at 2031.659 kb on + strand, within AO353_09260 at 2031.659 kb on + strand, within AO353_09260 at 2031.659 kb on + strand, within AO353_09260 at 2031.659 kb on + strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.660 kb on - strand, within AO353_09260 at 2031.783 kb on + strand, within AO353_09260 at 2031.783 kb on + strand, within AO353_09260 at 2031.783 kb on + strand, within AO353_09260 at 2031.784 kb on - strand, within AO353_09260 at 2031.824 kb on + strand, within AO353_09260 at 2031.824 kb on + strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.825 kb on - strand, within AO353_09260 at 2031.903 kb on + strand, within AO353_09260 at 2031.943 kb on - strand, within AO353_09260 at 2031.974 kb on + strand, within AO353_09260 at 2031.974 kb on + strand, within AO353_09260 at 2032.059 kb on + strand, within AO353_09260 at 2032.059 kb on + strand, within AO353_09260 at 2032.078 kb on + strand, within AO353_09260 at 2032.078 kb on + strand, within AO353_09260 at 2032.079 kb on - strand, within AO353_09260 at 2032.079 kb on - strand, within AO353_09260 at 2032.079 kb on - strand, within AO353_09260 at 2032.103 kb on + strand at 2032.103 kb on + strand at 2032.103 kb on + strand at 2032.104 kb on - strand at 2032.104 kb on - strand at 2032.104 kb on - strand at 2032.104 kb on - strand at 2032.104 kb on - strand at 2032.165 kb on - strand at 2032.165 kb on - strand at 2032.179 kb on - strand at 2032.205 kb on + strand at 2032.205 kb on + strand at 2032.205 kb on + strand at 2032.205 kb on + strand at 2032.205 kb on + strand at 2032.206 kb on - strand at 2032.206 kb on - strand at 2032.206 kb on - strand at 2032.206 kb on - strand at 2032.207 kb on + strand at 2032.207 kb on + strand at 2032.208 kb on - strand at 2032.208 kb on - strand at 2032.208 kb on - strand at 2032.237 kb on - strand at 2032.336 kb on + strand at 2032.337 kb on - strand at 2032.337 kb on - strand at 2032.368 kb on + strand at 2032.368 kb on + strand at 2032.368 kb on + strand at 2032.368 kb on + strand at 2032.377 kb on + strand at 2032.377 kb on + strand at 2032.377 kb on + strand at 2032.377 kb on + strand at 2032.428 kb on + strand at 2032.428 kb on + strand at 2032.428 kb on + strand at 2032.428 kb on + strand at 2033.196 kb on + strand, within AO353_09265 at 2033.196 kb on + strand, within AO353_09265 at 2033.196 kb on + strand, within AO353_09265 at 2033.196 kb on + strand, within AO353_09265 at 2033.196 kb on + strand, within AO353_09265 at 2033.196 kb on + strand, within AO353_09265 at 2033.296 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.964 kb on + strand at 2033.965 kb on - strand at 2033.965 kb on - strand at 2033.965 kb on - strand at 2033.965 kb on - strand at 2033.972 kb on + strand at 2034.075 kb on + strand at 2034.075 kb on + strand at 2034.075 kb on + strand at 2034.096 kb on + strand at 2034.096 kb on + strand at 2034.096 kb on + strand at 2034.096 kb on + strand at 2034.096 kb on + strand at 2034.096 kb on + strand at 2034.128 kb on + strand, within AO353_09275 at 2034.128 kb on + strand, within AO353_09275 at 2034.128 kb on + strand, within AO353_09275 at 2034.168 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275 at 2034.280 kb on + strand, within AO353_09275
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 2,031,477 + -1.2 2,031,477 + +0.4 2,031,477 + -0.9 2,031,478 - -0.4 2,031,478 - -2.6 2,031,478 - +0.4 2,031,629 + AO353_09260 0.26 -0.6 2,031,630 - AO353_09260 0.26 +0.4 2,031,659 + AO353_09260 0.30 -1.2 2,031,659 + AO353_09260 0.30 -1.6 2,031,659 + AO353_09260 0.30 -1.6 2,031,659 + AO353_09260 0.30 -1.2 2,031,660 - AO353_09260 0.30 +2.0 2,031,660 - AO353_09260 0.30 -1.2 2,031,660 - AO353_09260 0.30 -0.6 2,031,660 - AO353_09260 0.30 +0.4 2,031,660 - AO353_09260 0.30 +1.9 2,031,660 - AO353_09260 0.30 -0.8 2,031,660 - AO353_09260 0.30 +0.4 2,031,660 - AO353_09260 0.30 +0.4 2,031,660 - AO353_09260 0.30 -0.6 2,031,660 - AO353_09260 0.30 -0.6 2,031,660 - AO353_09260 0.30 -1.9 2,031,660 - AO353_09260 0.30 -0.6 2,031,660 - AO353_09260 0.30 +2.0 2,031,660 - AO353_09260 0.30 -1.6 2,031,783 + AO353_09260 0.47 -1.7 2,031,783 + AO353_09260 0.47 -1.2 2,031,783 + AO353_09260 0.47 -0.6 2,031,784 - AO353_09260 0.47 -0.6 2,031,824 + AO353_09260 0.53 -1.2 2,031,824 + AO353_09260 0.53 +1.1 2,031,825 - AO353_09260 0.53 -2.4 2,031,825 - AO353_09260 0.53 -0.6 2,031,825 - AO353_09260 0.53 +0.8 2,031,825 - AO353_09260 0.53 -2.4 2,031,825 - AO353_09260 0.53 +0.4 2,031,825 - AO353_09260 0.53 -1.9 2,031,825 - AO353_09260 0.53 +1.4 2,031,825 - AO353_09260 0.53 +1.6 2,031,825 - AO353_09260 0.53 +0.4 2,031,825 - AO353_09260 0.53 -1.9 2,031,825 - AO353_09260 0.53 -1.6 2,031,903 + AO353_09260 0.64 -1.2 2,031,943 - AO353_09260 0.69 -0.3 2,031,974 + AO353_09260 0.74 +0.4 2,031,974 + AO353_09260 0.74 -1.9 2,032,059 + AO353_09260 0.85 -0.6 2,032,059 + AO353_09260 0.85 -1.6 2,032,078 + AO353_09260 0.88 -0.2 2,032,078 + AO353_09260 0.88 -0.0 2,032,079 - AO353_09260 0.88 -0.6 2,032,079 - AO353_09260 0.88 -0.6 2,032,079 - AO353_09260 0.88 -1.6 2,032,103 + +1.4 2,032,103 + -1.2 2,032,103 + -0.0 2,032,104 - +2.4 2,032,104 - -1.9 2,032,104 - -1.6 2,032,104 - +1.6 2,032,104 - +1.4 2,032,165 - -1.3 2,032,165 - -0.4 2,032,179 - -0.3 2,032,205 + +2.4 2,032,205 + +0.7 2,032,205 + +0.8 2,032,205 + -1.6 2,032,205 + -1.6 2,032,206 - -0.6 2,032,206 - -1.6 2,032,206 - +0.2 2,032,206 - +0.3 2,032,207 + -1.6 2,032,207 + -1.2 2,032,208 - -2.4 2,032,208 - +1.1 2,032,208 - -1.2 2,032,237 - -0.1 2,032,336 + +0.7 2,032,337 - -2.9 2,032,337 - -0.6 2,032,368 + +1.7 2,032,368 + -0.6 2,032,368 + +1.4 2,032,368 + -2.9 2,032,377 + +0.6 2,032,377 + +1.4 2,032,377 + -1.6 2,032,377 + -1.6 2,032,428 + -0.6 2,032,428 + +0.6 2,032,428 + +4.0 2,032,428 + -1.2 2,033,196 + AO353_09265 0.88 -1.2 2,033,196 + AO353_09265 0.88 -0.3 2,033,196 + AO353_09265 0.88 -1.2 2,033,196 + AO353_09265 0.88 +0.4 2,033,196 + AO353_09265 0.88 -0.6 2,033,196 + AO353_09265 0.88 -1.2 2,033,296 + -1.2 2,033,964 + +1.1 2,033,964 + -0.6 2,033,964 + +2.2 2,033,964 + -1.2 2,033,964 + -1.6 2,033,964 + -0.9 2,033,964 + -2.3 2,033,964 + -0.6 2,033,964 + -1.9 2,033,965 - -2.4 2,033,965 - +0.1 2,033,965 - -0.6 2,033,965 - -1.6 2,033,972 + -2.8 2,034,075 + -1.6 2,034,075 + -1.0 2,034,075 + +0.7 2,034,096 + +1.4 2,034,096 + -1.9 2,034,096 + +2.7 2,034,096 + +1.4 2,034,096 + -0.6 2,034,096 + +2.2 2,034,128 + AO353_09275 0.11 +1.4 2,034,128 + AO353_09275 0.11 +1.4 2,034,128 + AO353_09275 0.11 +0.1 2,034,168 + AO353_09275 0.26 -1.6 2,034,280 + AO353_09275 0.68 -0.6 2,034,280 + AO353_09275 0.68 -0.6 2,034,280 + AO353_09275 0.68 +0.4 2,034,280 + AO353_09275 0.68 +1.0 2,034,280 + AO353_09275 0.68 -2.8 2,034,280 + AO353_09275 0.68 -0.6
Or see this region's nucleotide sequence