Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08900 and AO353_08905 are separated by 115 nucleotides AO353_08905 and AO353_08910 are separated by 41 nucleotides AO353_08910 and AO353_08915 are separated by 133 nucleotides
AO353_08900: AO353_08900 - hypothetical protein, at 1,955,832 to 1,957,067
_08900
AO353_08905: AO353_08905 - isoprenoid biosynthesis protein, at 1,957,183 to 1,957,848
_08905
AO353_08910: AO353_08910 - hypothetical protein, at 1,957,890 to 1,958,345
_08910
AO353_08915: AO353_08915 - cystathionine gamma-synthase, at 1,958,479 to 1,960,377
_08915
Position (kb)
1957
1958
1959 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 1956.890 kb on - strand, within AO353_08900 at 1956.890 kb on - strand, within AO353_08900 at 1956.979 kb on + strand at 1956.980 kb on - strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.983 kb on + strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1956.984 kb on - strand at 1957.051 kb on + strand at 1957.052 kb on - strand at 1957.052 kb on - strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.102 kb on + strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.103 kb on - strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.119 kb on + strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.120 kb on - strand at 1957.125 kb on + strand at 1957.125 kb on + strand at 1957.145 kb on + strand at 1957.145 kb on + strand at 1957.146 kb on - strand at 1957.146 kb on - strand at 1957.146 kb on - strand at 1957.146 kb on - strand at 1957.156 kb on + strand at 1957.156 kb on + strand at 1957.156 kb on + strand at 1957.157 kb on - strand at 1957.157 kb on - strand at 1957.157 kb on - strand at 1957.157 kb on - strand at 1957.205 kb on + strand at 1957.205 kb on + strand at 1957.205 kb on + strand at 1957.205 kb on + strand at 1957.205 kb on + strand at 1957.206 kb on - strand at 1957.206 kb on - strand at 1957.206 kb on - strand at 1957.206 kb on - strand at 1957.206 kb on - strand at 1957.225 kb on + strand at 1957.225 kb on + strand at 1957.225 kb on + strand at 1957.225 kb on + strand at 1957.226 kb on - strand at 1957.226 kb on - strand at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.759 kb on + strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.760 kb on - strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.761 kb on + strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.762 kb on - strand, within AO353_08905 at 1957.803 kb on + strand at 1957.803 kb on + strand at 1957.803 kb on + strand at 1957.803 kb on + strand at 1957.803 kb on + strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.804 kb on - strand at 1957.846 kb on + strand at 1957.847 kb on - strand at 1958.019 kb on - strand, within AO353_08910 at 1958.167 kb on + strand, within AO353_08910 at 1958.168 kb on - strand, within AO353_08910 at 1958.168 kb on - strand, within AO353_08910 at 1958.352 kb on + strand at 1958.352 kb on + strand at 1958.353 kb on - strand at 1958.353 kb on - strand at 1958.353 kb on - strand at 1958.353 kb on - strand at 1958.389 kb on + strand at 1958.436 kb on + strand at 1958.436 kb on + strand at 1958.475 kb on - strand at 1958.480 kb on + strand at 1958.523 kb on + strand at 1958.523 kb on + strand at 1958.524 kb on - strand at 1958.524 kb on - strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.525 kb on + strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.526 kb on - strand at 1958.573 kb on + strand at 1958.817 kb on + strand, within AO353_08915 at 1958.856 kb on - strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.954 kb on + strand, within AO353_08915 at 1958.955 kb on - strand, within AO353_08915 at 1958.955 kb on - strand, within AO353_08915 at 1958.955 kb on - strand, within AO353_08915 at 1958.955 kb on - strand, within AO353_08915 at 1959.083 kb on + strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.084 kb on - strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.254 kb on + strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915 at 1959.255 kb on - strand, within AO353_08915
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 1,956,890 - AO353_08900 0.86 -1.9 1,956,890 - AO353_08900 0.86 +0.4 1,956,979 + +0.4 1,956,980 - -1.9 1,956,983 + +1.1 1,956,983 + -1.0 1,956,983 + -1.0 1,956,983 + -2.4 1,956,983 + -1.9 1,956,983 + -0.0 1,956,983 + +1.2 1,956,983 + -1.2 1,956,984 - -0.6 1,956,984 - +0.8 1,956,984 - -0.3 1,956,984 - -2.6 1,956,984 - -1.9 1,956,984 - -1.9 1,956,984 - +0.2 1,956,984 - +1.1 1,956,984 - -0.6 1,957,051 + -0.6 1,957,052 - +1.1 1,957,052 - +2.3 1,957,102 + -1.8 1,957,102 + -1.1 1,957,102 + -0.6 1,957,102 + -1.9 1,957,102 + +1.8 1,957,102 + +1.7 1,957,102 + -1.6 1,957,102 + +3.2 1,957,103 - +0.4 1,957,103 - +2.7 1,957,103 - +0.5 1,957,103 - +0.4 1,957,103 - +1.0 1,957,103 - -2.2 1,957,103 - +2.6 1,957,103 - +1.2 1,957,103 - -3.3 1,957,103 - -0.6 1,957,119 + -0.9 1,957,119 + -0.8 1,957,119 + +0.4 1,957,119 + -0.9 1,957,119 + -2.6 1,957,119 + -0.3 1,957,119 + +0.4 1,957,120 - +1.0 1,957,120 - +1.6 1,957,120 - -1.9 1,957,120 - -0.6 1,957,120 - -0.6 1,957,120 - -2.2 1,957,120 - -1.9 1,957,120 - +1.7 1,957,125 + -0.0 1,957,125 + -1.2 1,957,145 + +0.3 1,957,145 + -0.6 1,957,146 - +2.6 1,957,146 - +1.1 1,957,146 - -0.3 1,957,146 - -0.6 1,957,156 + +0.8 1,957,156 + -0.6 1,957,156 + +0.4 1,957,157 - +2.2 1,957,157 - +2.1 1,957,157 - +2.0 1,957,157 - -0.0 1,957,205 + +0.0 1,957,205 + +0.8 1,957,205 + -0.6 1,957,205 + +0.4 1,957,205 + +1.4 1,957,206 - -0.6 1,957,206 - -1.2 1,957,206 - +0.4 1,957,206 - +1.4 1,957,206 - +0.4 1,957,225 + +1.4 1,957,225 + +1.4 1,957,225 + -2.8 1,957,225 + +0.4 1,957,226 - -1.6 1,957,226 - -1.2 1,957,759 + AO353_08905 0.86 -1.2 1,957,759 + AO353_08905 0.86 +0.4 1,957,759 + AO353_08905 0.86 -0.8 1,957,759 + AO353_08905 0.86 +0.4 1,957,759 + AO353_08905 0.86 -0.6 1,957,759 + AO353_08905 0.86 -1.6 1,957,759 + AO353_08905 0.86 -2.2 1,957,759 + AO353_08905 0.86 -0.8 1,957,759 + AO353_08905 0.86 -0.2 1,957,759 + AO353_08905 0.86 +0.4 1,957,759 + AO353_08905 0.86 -0.6 1,957,759 + AO353_08905 0.86 +1.0 1,957,760 - AO353_08905 0.87 -1.2 1,957,760 - AO353_08905 0.87 -2.2 1,957,760 - AO353_08905 0.87 -1.6 1,957,760 - AO353_08905 0.87 -1.9 1,957,760 - AO353_08905 0.87 +2.4 1,957,760 - AO353_08905 0.87 +0.4 1,957,760 - AO353_08905 0.87 -1.9 1,957,760 - AO353_08905 0.87 +1.0 1,957,760 - AO353_08905 0.87 -2.2 1,957,760 - AO353_08905 0.87 +1.3 1,957,760 - AO353_08905 0.87 -1.2 1,957,761 + AO353_08905 0.87 -1.2 1,957,761 + AO353_08905 0.87 -3.5 1,957,761 + AO353_08905 0.87 -1.2 1,957,761 + AO353_08905 0.87 -2.6 1,957,761 + AO353_08905 0.87 -0.8 1,957,761 + AO353_08905 0.87 +2.3 1,957,761 + AO353_08905 0.87 -1.9 1,957,761 + AO353_08905 0.87 -0.3 1,957,761 + AO353_08905 0.87 +0.8 1,957,762 - AO353_08905 0.87 +0.4 1,957,762 - AO353_08905 0.87 -0.2 1,957,762 - AO353_08905 0.87 -0.6 1,957,762 - AO353_08905 0.87 -1.0 1,957,762 - AO353_08905 0.87 -1.6 1,957,762 - AO353_08905 0.87 +2.0 1,957,762 - AO353_08905 0.87 +3.7 1,957,762 - AO353_08905 0.87 -0.8 1,957,762 - AO353_08905 0.87 -0.6 1,957,803 + -3.1 1,957,803 + -1.6 1,957,803 + -1.9 1,957,803 + -1.2 1,957,803 + -2.8 1,957,804 - -2.2 1,957,804 - -2.2 1,957,804 - -0.6 1,957,804 - -2.2 1,957,804 - -2.2 1,957,804 - -1.2 1,957,804 - -2.8 1,957,804 - +0.8 1,957,846 + +2.0 1,957,847 - -1.6 1,958,019 - AO353_08910 0.28 -1.6 1,958,167 + AO353_08910 0.61 -0.3 1,958,168 - AO353_08910 0.61 -2.4 1,958,168 - AO353_08910 0.61 -1.9 1,958,352 + -1.6 1,958,352 + -0.6 1,958,353 - -0.0 1,958,353 - -2.8 1,958,353 - -2.4 1,958,353 - -1.2 1,958,389 + -1.6 1,958,436 + +0.4 1,958,436 + +0.8 1,958,475 - -0.0 1,958,480 + +0.4 1,958,523 + +1.4 1,958,523 + -1.6 1,958,524 - -2.2 1,958,524 - -0.3 1,958,525 + +0.7 1,958,525 + -0.0 1,958,525 + -1.2 1,958,525 + -1.6 1,958,525 + -1.2 1,958,525 + -1.6 1,958,525 + -2.1 1,958,525 + -1.6 1,958,525 + -1.2 1,958,525 + -1.3 1,958,525 + +0.8 1,958,525 + +0.4 1,958,525 + -0.1 1,958,525 + +0.6 1,958,525 + -0.3 1,958,525 + -0.6 1,958,525 + +0.4 1,958,525 + -1.2 1,958,526 - -1.9 1,958,526 - +0.8 1,958,526 - -2.4 1,958,526 - -0.6 1,958,526 - -0.6 1,958,526 - -0.4 1,958,526 - -1.8 1,958,526 - -0.6 1,958,526 - +0.4 1,958,526 - +0.2 1,958,526 - +2.5 1,958,526 - +4.7 1,958,526 - +1.0 1,958,526 - -0.6 1,958,526 - +2.0 1,958,573 + +0.4 1,958,817 + AO353_08915 0.18 +3.1 1,958,856 - AO353_08915 0.20 +2.6 1,958,954 + AO353_08915 0.25 -2.9 1,958,954 + AO353_08915 0.25 -1.9 1,958,954 + AO353_08915 0.25 -0.2 1,958,954 + AO353_08915 0.25 +1.7 1,958,954 + AO353_08915 0.25 -0.6 1,958,954 + AO353_08915 0.25 -0.6 1,958,955 - AO353_08915 0.25 -0.1 1,958,955 - AO353_08915 0.25 +2.3 1,958,955 - AO353_08915 0.25 +0.4 1,958,955 - AO353_08915 0.25 +2.4 1,959,083 + AO353_08915 0.32 +1.4 1,959,084 - AO353_08915 0.32 -2.2 1,959,084 - AO353_08915 0.32 +1.4 1,959,084 - AO353_08915 0.32 +1.6 1,959,084 - AO353_08915 0.32 +2.6 1,959,084 - AO353_08915 0.32 +3.1 1,959,084 - AO353_08915 0.32 -0.6 1,959,254 + AO353_08915 0.41 +0.3 1,959,254 + AO353_08915 0.41 -1.2 1,959,254 + AO353_08915 0.41 +0.5 1,959,254 + AO353_08915 0.41 +3.0 1,959,254 + AO353_08915 0.41 +1.1 1,959,254 + AO353_08915 0.41 +1.1 1,959,254 + AO353_08915 0.41 +1.7 1,959,254 + AO353_08915 0.41 -0.6 1,959,254 + AO353_08915 0.41 +0.3 1,959,254 + AO353_08915 0.41 -0.9 1,959,254 + AO353_08915 0.41 +0.4 1,959,254 + AO353_08915 0.41 -0.8 1,959,254 + AO353_08915 0.41 -1.6 1,959,254 + AO353_08915 0.41 +2.4 1,959,254 + AO353_08915 0.41 +3.0 1,959,254 + AO353_08915 0.41 +2.4 1,959,254 + AO353_08915 0.41 -2.2 1,959,254 + AO353_08915 0.41 -1.9 1,959,254 + AO353_08915 0.41 -1.2 1,959,254 + AO353_08915 0.41 -0.4 1,959,254 + AO353_08915 0.41 -1.9 1,959,254 + AO353_08915 0.41 -4.2 1,959,254 + AO353_08915 0.41 +0.8 1,959,254 + AO353_08915 0.41 +0.1 1,959,254 + AO353_08915 0.41 -1.4 1,959,254 + AO353_08915 0.41 -2.2 1,959,254 + AO353_08915 0.41 -1.6 1,959,255 - AO353_08915 0.41 -2.6 1,959,255 - AO353_08915 0.41 +0.4 1,959,255 - AO353_08915 0.41 -0.8 1,959,255 - AO353_08915 0.41 +1.7 1,959,255 - AO353_08915 0.41 +1.4 1,959,255 - AO353_08915 0.41 -1.2 1,959,255 - AO353_08915 0.41 -1.6 1,959,255 - AO353_08915 0.41 -1.2 1,959,255 - AO353_08915 0.41 -0.9 1,959,255 - AO353_08915 0.41 +0.4 1,959,255 - AO353_08915 0.41 +0.1 1,959,255 - AO353_08915 0.41 +1.6 1,959,255 - AO353_08915 0.41 +3.4 1,959,255 - AO353_08915 0.41 -2.8 1,959,255 - AO353_08915 0.41 -1.9 1,959,255 - AO353_08915 0.41 -0.8 1,959,255 - AO353_08915 0.41 +0.4 1,959,255 - AO353_08915 0.41 +0.1
Or see this region's nucleotide sequence