Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07965 and AO353_07970 are separated by 158 nucleotides AO353_07970 and AO353_07975 are separated by 95 nucleotides AO353_07975 and AO353_07980 are separated by 182 nucleotides
AO353_07965: AO353_07965 - S-adenosylmethionine synthetase, at 1,756,486 to 1,757,676
_07965
AO353_07970: AO353_07970 - aromatic ring-opening dioxygenase LigA, at 1,757,835 to 1,759,517
_07970
AO353_07975: AO353_07975 - hypothetical protein, at 1,759,613 to 1,760,008
_07975
AO353_07980: AO353_07980 - cytochrome C, at 1,760,191 to 1,760,640
_07980
Position (kb)
1757
1758
1759
1760 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1757.675 kb on - strand at 1757.675 kb on - strand at 1757.675 kb on - strand at 1757.675 kb on - strand at 1757.797 kb on + strand at 1757.797 kb on + strand at 1757.797 kb on + strand at 1757.797 kb on + strand at 1757.798 kb on - strand at 1757.798 kb on - strand at 1757.798 kb on - strand at 1757.798 kb on - strand at 1757.798 kb on - strand at 1757.798 kb on - strand at 1757.903 kb on + strand at 1757.903 kb on + strand at 1757.903 kb on + strand at 1757.903 kb on + strand at 1757.903 kb on + strand at 1757.903 kb on + strand at 1757.903 kb on + strand at 1757.903 kb on + strand at 1757.904 kb on - strand at 1757.985 kb on + strand at 1757.985 kb on + strand at 1757.985 kb on + strand at 1757.985 kb on + strand at 1757.985 kb on + strand at 1757.985 kb on + strand at 1757.985 kb on + strand at 1757.986 kb on - strand at 1757.986 kb on - strand at 1757.986 kb on - strand at 1757.986 kb on - strand at 1758.024 kb on + strand, within AO353_07970 at 1758.024 kb on + strand, within AO353_07970 at 1758.024 kb on + strand, within AO353_07970 at 1758.024 kb on + strand, within AO353_07970 at 1758.025 kb on - strand, within AO353_07970 at 1758.025 kb on - strand, within AO353_07970 at 1758.201 kb on - strand, within AO353_07970 at 1758.246 kb on + strand, within AO353_07970 at 1758.291 kb on - strand, within AO353_07970 at 1758.387 kb on + strand, within AO353_07970 at 1758.387 kb on + strand, within AO353_07970 at 1758.387 kb on + strand, within AO353_07970 at 1758.387 kb on + strand, within AO353_07970 at 1758.388 kb on - strand, within AO353_07970 at 1758.388 kb on - strand, within AO353_07970 at 1758.388 kb on - strand, within AO353_07970 at 1758.505 kb on + strand, within AO353_07970 at 1758.506 kb on - strand, within AO353_07970 at 1758.506 kb on - strand, within AO353_07970 at 1758.594 kb on + strand, within AO353_07970 at 1758.594 kb on + strand, within AO353_07970 at 1758.594 kb on + strand, within AO353_07970 at 1758.595 kb on - strand, within AO353_07970 at 1758.595 kb on - strand, within AO353_07970 at 1758.595 kb on - strand, within AO353_07970 at 1758.648 kb on + strand, within AO353_07970 at 1758.680 kb on + strand, within AO353_07970 at 1758.759 kb on + strand, within AO353_07970 at 1758.759 kb on + strand, within AO353_07970 at 1758.760 kb on - strand, within AO353_07970 at 1758.760 kb on - strand, within AO353_07970 at 1759.229 kb on + strand, within AO353_07970 at 1759.230 kb on - strand, within AO353_07970 at 1759.230 kb on - strand, within AO353_07970 at 1759.372 kb on + strand at 1759.372 kb on + strand at 1759.372 kb on + strand at 1759.372 kb on + strand at 1759.372 kb on + strand at 1759.373 kb on - strand at 1759.373 kb on - strand at 1759.373 kb on - strand at 1759.489 kb on + strand at 1759.489 kb on + strand at 1759.490 kb on - strand at 1759.490 kb on - strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.515 kb on + strand at 1759.516 kb on - strand at 1759.516 kb on - strand at 1759.516 kb on - strand at 1759.516 kb on - strand at 1759.516 kb on - strand at 1759.516 kb on - strand at 1759.519 kb on + strand at 1759.519 kb on + strand at 1759.519 kb on + strand at 1759.519 kb on + strand at 1759.519 kb on + strand at 1759.519 kb on + strand at 1759.519 kb on + strand at 1759.519 kb on + strand at 1759.520 kb on - strand at 1759.520 kb on - strand at 1759.520 kb on - strand at 1759.552 kb on + strand at 1760.003 kb on - strand at 1760.003 kb on - strand at 1760.003 kb on - strand at 1760.003 kb on - strand at 1760.006 kb on + strand at 1760.006 kb on + strand at 1760.006 kb on + strand at 1760.006 kb on + strand at 1760.006 kb on + strand at 1760.007 kb on - strand at 1760.007 kb on - strand at 1760.007 kb on - strand at 1760.007 kb on - strand at 1760.007 kb on - strand at 1760.007 kb on - strand at 1760.007 kb on - strand at 1760.173 kb on + strand at 1760.173 kb on + strand at 1760.173 kb on + strand at 1760.173 kb on + strand at 1760.173 kb on + strand at 1760.174 kb on - strand at 1760.174 kb on - strand at 1760.212 kb on - strand at 1760.223 kb on + strand at 1760.223 kb on + strand at 1760.223 kb on + strand at 1760.224 kb on - strand at 1760.224 kb on - strand at 1760.262 kb on + strand, within AO353_07980 at 1760.273 kb on + strand, within AO353_07980 at 1760.273 kb on + strand, within AO353_07980 at 1760.273 kb on + strand, within AO353_07980 at 1760.273 kb on + strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.274 kb on - strand, within AO353_07980 at 1760.484 kb on + strand, within AO353_07980 at 1760.484 kb on + strand, within AO353_07980 at 1760.484 kb on + strand, within AO353_07980 at 1760.484 kb on + strand, within AO353_07980 at 1760.485 kb on - strand, within AO353_07980 at 1760.485 kb on - strand, within AO353_07980 at 1760.485 kb on - strand, within AO353_07980
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 1,757,675 - -2.0 1,757,675 - -1.6 1,757,675 - +0.4 1,757,675 - -1.6 1,757,797 + -0.0 1,757,797 + -2.4 1,757,797 + -1.9 1,757,797 + -1.9 1,757,798 - +0.4 1,757,798 - +0.4 1,757,798 - -0.6 1,757,798 - +2.1 1,757,798 - +1.6 1,757,798 - +1.6 1,757,903 + +1.1 1,757,903 + -1.6 1,757,903 + -1.2 1,757,903 + -1.6 1,757,903 + -1.9 1,757,903 + -0.6 1,757,903 + +0.4 1,757,903 + -0.6 1,757,904 - -0.9 1,757,985 + -2.2 1,757,985 + +0.4 1,757,985 + +2.4 1,757,985 + +1.2 1,757,985 + -2.8 1,757,985 + -1.6 1,757,985 + +0.8 1,757,986 - -2.2 1,757,986 - -0.8 1,757,986 - +1.2 1,757,986 - -0.6 1,758,024 + AO353_07970 0.11 -1.2 1,758,024 + AO353_07970 0.11 -1.6 1,758,024 + AO353_07970 0.11 +0.4 1,758,024 + AO353_07970 0.11 -0.6 1,758,025 - AO353_07970 0.11 +0.4 1,758,025 - AO353_07970 0.11 -0.6 1,758,201 - AO353_07970 0.22 -1.2 1,758,246 + AO353_07970 0.24 +1.7 1,758,291 - AO353_07970 0.27 -1.9 1,758,387 + AO353_07970 0.33 +2.2 1,758,387 + AO353_07970 0.33 +0.4 1,758,387 + AO353_07970 0.33 -0.2 1,758,387 + AO353_07970 0.33 +2.2 1,758,388 - AO353_07970 0.33 +3.0 1,758,388 - AO353_07970 0.33 +3.2 1,758,388 - AO353_07970 0.33 -1.2 1,758,505 + AO353_07970 0.40 +0.4 1,758,506 - AO353_07970 0.40 -2.4 1,758,506 - AO353_07970 0.40 +2.7 1,758,594 + AO353_07970 0.45 +0.1 1,758,594 + AO353_07970 0.45 +0.4 1,758,594 + AO353_07970 0.45 -3.2 1,758,595 - AO353_07970 0.45 +2.3 1,758,595 - AO353_07970 0.45 -0.1 1,758,595 - AO353_07970 0.45 -1.2 1,758,648 + AO353_07970 0.48 +0.4 1,758,680 + AO353_07970 0.50 -1.6 1,758,759 + AO353_07970 0.55 +1.0 1,758,759 + AO353_07970 0.55 -1.2 1,758,760 - AO353_07970 0.55 -1.2 1,758,760 - AO353_07970 0.55 -0.6 1,759,229 + AO353_07970 0.83 -1.2 1,759,230 - AO353_07970 0.83 -1.2 1,759,230 - AO353_07970 0.83 -1.2 1,759,372 + -1.6 1,759,372 + -0.2 1,759,372 + +0.4 1,759,372 + -0.6 1,759,372 + -2.4 1,759,373 - +1.0 1,759,373 - +2.4 1,759,373 - -0.6 1,759,489 + +1.6 1,759,489 + -1.1 1,759,490 - -2.8 1,759,490 - -2.4 1,759,515 + -1.2 1,759,515 + -0.6 1,759,515 + +1.6 1,759,515 + -0.6 1,759,515 + +0.6 1,759,515 + -1.2 1,759,515 + +0.4 1,759,515 + -1.9 1,759,515 + -0.0 1,759,515 + -1.2 1,759,515 + -0.6 1,759,515 + -2.4 1,759,516 - -1.2 1,759,516 - -1.0 1,759,516 - -1.6 1,759,516 - +1.7 1,759,516 - -0.9 1,759,516 - +0.2 1,759,519 + -1.2 1,759,519 + +1.7 1,759,519 + -3.1 1,759,519 + +2.3 1,759,519 + -2.4 1,759,519 + -0.6 1,759,519 + -2.2 1,759,519 + +0.4 1,759,520 - +0.4 1,759,520 - -2.8 1,759,520 - -0.6 1,759,552 + -2.4 1,760,003 - -2.6 1,760,003 - +3.4 1,760,003 - +0.4 1,760,003 - -1.6 1,760,006 + -0.9 1,760,006 + +2.4 1,760,006 + -1.6 1,760,006 + -0.6 1,760,006 + +1.2 1,760,007 - -2.8 1,760,007 - +1.4 1,760,007 - -1.9 1,760,007 - -1.9 1,760,007 - +0.8 1,760,007 - +0.4 1,760,007 - -3.2 1,760,173 + -1.6 1,760,173 + +0.1 1,760,173 + -1.2 1,760,173 + -2.6 1,760,173 + +1.4 1,760,174 - +0.4 1,760,174 - -2.4 1,760,212 - +0.4 1,760,223 + -0.6 1,760,223 + -2.8 1,760,223 + -0.6 1,760,224 - +0.1 1,760,224 - -1.2 1,760,262 + AO353_07980 0.16 -0.8 1,760,273 + AO353_07980 0.18 +2.0 1,760,273 + AO353_07980 0.18 -0.2 1,760,273 + AO353_07980 0.18 +0.4 1,760,273 + AO353_07980 0.18 -0.9 1,760,274 - AO353_07980 0.18 -1.9 1,760,274 - AO353_07980 0.18 -1.9 1,760,274 - AO353_07980 0.18 +0.4 1,760,274 - AO353_07980 0.18 -2.8 1,760,274 - AO353_07980 0.18 +0.4 1,760,274 - AO353_07980 0.18 -0.4 1,760,274 - AO353_07980 0.18 -0.4 1,760,274 - AO353_07980 0.18 +0.9 1,760,274 - AO353_07980 0.18 +0.4 1,760,274 - AO353_07980 0.18 -1.2 1,760,274 - AO353_07980 0.18 -1.2 1,760,484 + AO353_07980 0.65 -1.2 1,760,484 + AO353_07980 0.65 +3.0 1,760,484 + AO353_07980 0.65 +0.4 1,760,484 + AO353_07980 0.65 +2.2 1,760,485 - AO353_07980 0.65 -0.4 1,760,485 - AO353_07980 0.65 -2.6 1,760,485 - AO353_07980 0.65 -1.2
Or see this region's nucleotide sequence