Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04580 and AO353_04585 are separated by 39 nucleotides AO353_04585 and AO353_04590 are separated by 113 nucleotides AO353_04590 and AO353_04595 overlap by 11 nucleotides
AO353_04580: AO353_04580 - GIY-YIG nuclease, at 989,392 to 989,712
_04580
AO353_04585: AO353_04585 - ketosteroid isomerase, at 989,752 to 990,222
_04585
AO353_04590: AO353_04590 - MFS transporter, at 990,336 to 991,652
_04590
AO353_04595: AO353_04595 - GntR family transcriptional regulator, at 991,642 to 992,301
_04595
Position (kb) 990
991
992 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 989.340 kb on + strand at 989.363 kb on + strand at 989.386 kb on + strand at 989.386 kb on + strand at 989.386 kb on + strand at 989.386 kb on + strand at 989.386 kb on + strand at 989.386 kb on + strand at 989.386 kb on + strand at 989.386 kb on + strand at 989.386 kb on + strand at 989.387 kb on - strand at 989.387 kb on - strand at 989.387 kb on - strand at 989.387 kb on - strand at 989.387 kb on - strand at 989.387 kb on - strand at 989.402 kb on - strand at 989.491 kb on - strand, within AO353_04580 at 989.510 kb on + strand, within AO353_04580 at 989.510 kb on + strand, within AO353_04580 at 989.510 kb on + strand, within AO353_04580 at 989.510 kb on + strand, within AO353_04580 at 989.510 kb on + strand, within AO353_04580 at 989.511 kb on - strand, within AO353_04580 at 989.556 kb on + strand, within AO353_04580 at 989.609 kb on + strand, within AO353_04580 at 989.609 kb on + strand, within AO353_04580 at 989.610 kb on - strand, within AO353_04580 at 989.639 kb on + strand, within AO353_04580 at 989.639 kb on + strand, within AO353_04580 at 989.639 kb on + strand, within AO353_04580 at 989.730 kb on + strand at 989.731 kb on - strand at 989.750 kb on + strand at 989.751 kb on - strand at 989.975 kb on + strand, within AO353_04585 at 989.975 kb on + strand, within AO353_04585 at 989.975 kb on + strand, within AO353_04585 at 989.975 kb on + strand, within AO353_04585 at 989.975 kb on + strand, within AO353_04585 at 989.975 kb on + strand, within AO353_04585 at 989.975 kb on + strand, within AO353_04585 at 989.976 kb on - strand, within AO353_04585 at 989.976 kb on - strand, within AO353_04585 at 989.976 kb on - strand, within AO353_04585 at 989.976 kb on - strand, within AO353_04585 at 990.141 kb on - strand, within AO353_04585 at 990.185 kb on + strand at 990.185 kb on + strand at 990.185 kb on + strand at 990.185 kb on + strand at 990.185 kb on + strand at 990.185 kb on + strand at 990.185 kb on + strand at 990.186 kb on - strand at 990.186 kb on - strand at 990.186 kb on - strand at 990.186 kb on - strand at 990.273 kb on + strand at 990.274 kb on - strand at 990.297 kb on - strand at 990.297 kb on - strand at 990.318 kb on - strand at 990.360 kb on + strand at 990.360 kb on + strand at 990.360 kb on + strand at 990.360 kb on + strand at 990.360 kb on + strand at 990.360 kb on + strand at 990.361 kb on - strand at 990.361 kb on - strand at 990.361 kb on - strand at 990.361 kb on - strand at 990.361 kb on - strand at 990.361 kb on - strand at 990.361 kb on - strand at 990.364 kb on + strand at 990.413 kb on + strand at 990.414 kb on - strand at 990.414 kb on - strand at 990.462 kb on + strand at 990.462 kb on + strand at 990.462 kb on + strand at 990.462 kb on + strand at 990.462 kb on + strand at 990.462 kb on + strand at 990.462 kb on + strand at 990.463 kb on - strand at 990.463 kb on - strand at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.500 kb on + strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.501 kb on - strand, within AO353_04590 at 990.503 kb on - strand, within AO353_04590 at 990.593 kb on + strand, within AO353_04590 at 990.652 kb on + strand, within AO353_04590 at 990.653 kb on - strand, within AO353_04590 at 990.857 kb on - strand, within AO353_04590 at 990.857 kb on - strand, within AO353_04590 at 990.857 kb on - strand, within AO353_04590 at 990.857 kb on - strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.883 kb on + strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 990.884 kb on - strand, within AO353_04590 at 991.111 kb on + strand, within AO353_04590 at 991.111 kb on + strand, within AO353_04590 at 991.111 kb on + strand, within AO353_04590 at 991.112 kb on - strand, within AO353_04590 at 991.112 kb on - strand, within AO353_04590 at 991.112 kb on - strand, within AO353_04590 at 991.506 kb on + strand, within AO353_04590 at 991.507 kb on - strand, within AO353_04590 at 991.607 kb on + strand at 991.607 kb on + strand at 991.808 kb on + strand, within AO353_04595 at 991.819 kb on - strand, within AO353_04595 at 991.831 kb on - strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.880 kb on + strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.881 kb on - strand, within AO353_04595 at 991.885 kb on - strand, within AO353_04595 at 992.251 kb on + strand at 992.252 kb on - strand at 992.252 kb on - strand at 992.326 kb on + strand at 992.348 kb on + strand at 992.348 kb on + strand at 992.349 kb on - strand at 992.385 kb on - strand at 992.385 kb on - strand at 992.385 kb on - strand at 992.385 kb on - strand at 992.426 kb on - strand at 992.426 kb on - strand at 992.426 kb on - strand at 992.432 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.442 kb on + strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.443 kb on - strand at 992.445 kb on + strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.446 kb on - strand at 992.467 kb on + strand at 992.540 kb on + strand at 992.563 kb on - strand at 992.639 kb on + strand at 992.639 kb on + strand at 992.639 kb on + strand at 992.640 kb on - strand at 992.640 kb on - strand at 992.640 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 989,340 + +0.2 989,363 + +0.7 989,386 + +2.4 989,386 + -3.4 989,386 + +2.0 989,386 + +2.7 989,386 + -1.4 989,386 + +0.2 989,386 + +1.6 989,386 + +3.2 989,386 + -0.7 989,387 - +0.4 989,387 - -1.8 989,387 - +2.6 989,387 - -1.4 989,387 - +1.2 989,387 - -0.2 989,402 - +1.2 989,491 - AO353_04580 0.31 -0.8 989,510 + AO353_04580 0.37 -1.8 989,510 + AO353_04580 0.37 +0.4 989,510 + AO353_04580 0.37 +0.2 989,510 + AO353_04580 0.37 +0.3 989,510 + AO353_04580 0.37 +0.9 989,511 - AO353_04580 0.37 +1.2 989,556 + AO353_04580 0.51 +0.2 989,609 + AO353_04580 0.68 +0.6 989,609 + AO353_04580 0.68 +1.2 989,610 - AO353_04580 0.68 +0.6 989,639 + AO353_04580 0.77 -1.4 989,639 + AO353_04580 0.77 -0.8 989,639 + AO353_04580 0.77 -1.8 989,730 + +0.2 989,731 - +3.6 989,750 + -3.2 989,751 - +2.2 989,975 + AO353_04585 0.47 -0.3 989,975 + AO353_04585 0.47 +1.1 989,975 + AO353_04585 0.47 +0.1 989,975 + AO353_04585 0.47 -3.2 989,975 + AO353_04585 0.47 -1.7 989,975 + AO353_04585 0.47 +1.1 989,975 + AO353_04585 0.47 +1.5 989,976 - AO353_04585 0.48 -0.6 989,976 - AO353_04585 0.48 +0.1 989,976 - AO353_04585 0.48 -0.4 989,976 - AO353_04585 0.48 -0.3 990,141 - AO353_04585 0.83 -3.9 990,185 + -0.3 990,185 + +1.4 990,185 + -2.4 990,185 + -0.9 990,185 + +1.0 990,185 + +0.1 990,185 + -0.9 990,186 - +1.2 990,186 - -0.9 990,186 - -0.9 990,186 - +1.1 990,273 + +0.1 990,274 - -1.9 990,297 - -3.4 990,297 - +0.1 990,318 - -1.4 990,360 + +2.1 990,360 + +0.9 990,360 + +2.4 990,360 + -1.1 990,360 + +0.7 990,360 + +2.0 990,361 - -0.9 990,361 - +3.3 990,361 - +1.4 990,361 - -0.9 990,361 - -0.9 990,361 - -2.2 990,361 - -1.9 990,364 + -0.9 990,413 + +1.5 990,414 - -2.4 990,414 - -0.3 990,462 + -1.9 990,462 + +1.5 990,462 + +0.1 990,462 + +2.6 990,462 + -3.3 990,462 + -0.9 990,462 + -2.7 990,463 - +0.1 990,463 - +1.5 990,500 + AO353_04590 0.12 +0.2 990,500 + AO353_04590 0.12 -1.4 990,500 + AO353_04590 0.12 -0.8 990,500 + AO353_04590 0.12 +2.2 990,500 + AO353_04590 0.12 -0.8 990,500 + AO353_04590 0.12 -1.6 990,500 + AO353_04590 0.12 +0.2 990,500 + AO353_04590 0.12 -0.8 990,500 + AO353_04590 0.12 +3.8 990,500 + AO353_04590 0.12 +0.2 990,500 + AO353_04590 0.12 -0.8 990,500 + AO353_04590 0.12 -1.4 990,500 + AO353_04590 0.12 -0.8 990,500 + AO353_04590 0.12 -2.2 990,501 - AO353_04590 0.13 +3.2 990,501 - AO353_04590 0.13 +0.2 990,501 - AO353_04590 0.13 -3.0 990,501 - AO353_04590 0.13 -0.8 990,501 - AO353_04590 0.13 -1.8 990,501 - AO353_04590 0.13 -1.4 990,501 - AO353_04590 0.13 +1.2 990,501 - AO353_04590 0.13 +2.7 990,501 - AO353_04590 0.13 -1.0 990,501 - AO353_04590 0.13 +2.3 990,501 - AO353_04590 0.13 -0.6 990,501 - AO353_04590 0.13 +0.8 990,503 - AO353_04590 0.13 -1.4 990,593 + AO353_04590 0.20 +1.2 990,652 + AO353_04590 0.24 +2.7 990,653 - AO353_04590 0.24 +0.2 990,857 - AO353_04590 0.40 -0.4 990,857 - AO353_04590 0.40 +0.2 990,857 - AO353_04590 0.40 -3.0 990,857 - AO353_04590 0.40 -0.2 990,883 + AO353_04590 0.42 +0.2 990,883 + AO353_04590 0.42 +0.2 990,883 + AO353_04590 0.42 -0.8 990,883 + AO353_04590 0.42 +0.2 990,883 + AO353_04590 0.42 +0.2 990,883 + AO353_04590 0.42 +0.2 990,883 + AO353_04590 0.42 +1.5 990,883 + AO353_04590 0.42 -1.8 990,883 + AO353_04590 0.42 +0.5 990,883 + AO353_04590 0.42 +1.2 990,883 + AO353_04590 0.42 -3.0 990,884 - AO353_04590 0.42 -2.2 990,884 - AO353_04590 0.42 +2.2 990,884 - AO353_04590 0.42 +1.3 990,884 - AO353_04590 0.42 -1.4 990,884 - AO353_04590 0.42 +0.2 990,884 - AO353_04590 0.42 -0.3 990,884 - AO353_04590 0.42 -1.8 990,884 - AO353_04590 0.42 -2.4 990,884 - AO353_04590 0.42 +0.7 990,884 - AO353_04590 0.42 -0.8 990,884 - AO353_04590 0.42 -0.5 991,111 + AO353_04590 0.59 +1.7 991,111 + AO353_04590 0.59 +0.2 991,111 + AO353_04590 0.59 -0.8 991,112 - AO353_04590 0.59 +1.4 991,112 - AO353_04590 0.59 +1.2 991,112 - AO353_04590 0.59 +0.2 991,506 + AO353_04590 0.89 -1.2 991,507 - AO353_04590 0.89 -2.4 991,607 + +0.2 991,607 + +0.2 991,808 + AO353_04595 0.25 -0.4 991,819 - AO353_04595 0.27 -1.4 991,831 - AO353_04595 0.29 -0.1 991,880 + AO353_04595 0.36 +0.7 991,880 + AO353_04595 0.36 +2.4 991,880 + AO353_04595 0.36 -2.2 991,880 + AO353_04595 0.36 -1.4 991,880 + AO353_04595 0.36 -1.8 991,880 + AO353_04595 0.36 +1.2 991,880 + AO353_04595 0.36 +2.2 991,880 + AO353_04595 0.36 -0.2 991,880 + AO353_04595 0.36 +0.2 991,880 + AO353_04595 0.36 +1.4 991,880 + AO353_04595 0.36 +0.2 991,880 + AO353_04595 0.36 +1.2 991,880 + AO353_04595 0.36 -0.8 991,880 + AO353_04595 0.36 -1.4 991,880 + AO353_04595 0.36 +0.8 991,880 + AO353_04595 0.36 -0.8 991,880 + AO353_04595 0.36 -0.1 991,880 + AO353_04595 0.36 -1.2 991,880 + AO353_04595 0.36 +0.2 991,880 + AO353_04595 0.36 +0.4 991,880 + AO353_04595 0.36 +2.7 991,880 + AO353_04595 0.36 -1.4 991,880 + AO353_04595 0.36 -0.8 991,880 + AO353_04595 0.36 -0.2 991,880 + AO353_04595 0.36 -0.8 991,880 + AO353_04595 0.36 +1.0 991,880 + AO353_04595 0.36 -0.3 991,880 + AO353_04595 0.36 -2.2 991,881 - AO353_04595 0.36 -0.3 991,881 - AO353_04595 0.36 +0.2 991,881 - AO353_04595 0.36 -1.1 991,881 - AO353_04595 0.36 -0.8 991,881 - AO353_04595 0.36 -0.3 991,881 - AO353_04595 0.36 -0.4 991,881 - AO353_04595 0.36 -0.4 991,881 - AO353_04595 0.36 -1.8 991,881 - AO353_04595 0.36 -0.2 991,881 - AO353_04595 0.36 -0.8 991,881 - AO353_04595 0.36 +0.4 991,881 - AO353_04595 0.36 +1.6 991,881 - AO353_04595 0.36 +0.6 991,881 - AO353_04595 0.36 -1.0 991,881 - AO353_04595 0.36 +0.7 991,881 - AO353_04595 0.36 -0.8 991,881 - AO353_04595 0.36 +1.3 991,881 - AO353_04595 0.36 +2.5 991,881 - AO353_04595 0.36 -1.8 991,881 - AO353_04595 0.36 +0.7 991,881 - AO353_04595 0.36 -3.0 991,881 - AO353_04595 0.36 +0.2 991,881 - AO353_04595 0.36 +0.5 991,881 - AO353_04595 0.36 +0.9 991,881 - AO353_04595 0.36 +1.9 991,881 - AO353_04595 0.36 +0.2 991,881 - AO353_04595 0.36 +2.1 991,881 - AO353_04595 0.36 +1.2 991,881 - AO353_04595 0.36 +3.3 991,881 - AO353_04595 0.36 +2.1 991,881 - AO353_04595 0.36 -1.4 991,881 - AO353_04595 0.36 -1.4 991,885 - AO353_04595 0.37 +1.2 992,251 + +1.4 992,252 - +0.6 992,252 - +0.7 992,326 + -2.2 992,348 + +2.6 992,348 + -1.8 992,349 - -0.3 992,385 - -2.2 992,385 - +2.7 992,385 - +0.2 992,385 - -0.4 992,426 - +1.0 992,426 - +0.2 992,426 - +0.9 992,432 + +2.0 992,442 + -1.4 992,442 + -2.4 992,442 + -2.6 992,442 + +2.8 992,442 + -3.2 992,442 + +1.2 992,442 + +0.3 992,442 + +0.4 992,443 - +4.2 992,443 - +0.2 992,443 - -0.8 992,443 - -0.8 992,443 - +0.9 992,443 - +0.7 992,443 - -0.8 992,443 - -0.8 992,443 - -1.8 992,445 + -1.8 992,446 - -1.8 992,446 - +0.2 992,446 - -1.8 992,446 - -1.4 992,446 - +0.2 992,446 - +0.5 992,446 - -0.3 992,467 + -0.8 992,540 + -2.6 992,563 - +2.7 992,639 + -1.2 992,639 + -0.8 992,639 + -0.1 992,640 - -2.2 992,640 - +0.8 992,640 - +1.0
Or see this region's nucleotide sequence