Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03455 and AO353_03460 are separated by 36 nucleotides AO353_03460 and AO353_03465 are separated by 496 nucleotides
AO353_03455: AO353_03455 - acyl-CoA transferase, at 737,540 to 738,886
_03455
AO353_03460: AO353_03460 - 3-methyladenine DNA glycosylase 2, at 738,923 to 739,786
_03460
AO353_03465: AO353_03465 - arginine-ornithine antiporter, at 740,283 to 741,710
_03465
Position (kb) 738
739
740 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 738.642 kb on + strand, within AO353_03455 at 738.642 kb on + strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.807 kb on + strand at 738.808 kb on - strand at 738.808 kb on - strand at 738.820 kb on - strand at 738.967 kb on - strand at 738.967 kb on - strand at 739.113 kb on + strand, within AO353_03460 at 739.113 kb on + strand, within AO353_03460 at 739.114 kb on - strand, within AO353_03460 at 739.114 kb on - strand, within AO353_03460 at 739.162 kb on + strand, within AO353_03460 at 739.345 kb on - strand, within AO353_03460 at 739.416 kb on - strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.604 kb on + strand, within AO353_03460 at 739.605 kb on - strand, within AO353_03460 at 739.605 kb on - strand, within AO353_03460 at 739.605 kb on - strand, within AO353_03460 at 739.605 kb on - strand, within AO353_03460 at 739.605 kb on - strand, within AO353_03460 at 739.618 kb on + strand, within AO353_03460 at 739.618 kb on + strand, within AO353_03460 at 739.619 kb on - strand, within AO353_03460 at 739.633 kb on + strand, within AO353_03460 at 739.755 kb on + strand at 739.755 kb on + strand at 739.756 kb on - strand at 739.767 kb on + strand at 739.768 kb on - strand at 739.834 kb on + strand at 739.834 kb on + strand at 739.834 kb on + strand at 739.834 kb on + strand at 739.834 kb on + strand at 739.834 kb on + strand at 739.835 kb on - strand at 739.835 kb on - strand at 739.835 kb on - strand at 739.835 kb on - strand at 739.835 kb on - strand at 739.835 kb on - strand at 739.878 kb on - strand at 739.878 kb on - strand at 739.896 kb on + strand at 739.897 kb on - strand at 739.897 kb on - strand at 739.897 kb on - strand at 739.897 kb on - strand at 739.900 kb on + strand at 739.900 kb on + strand at 739.901 kb on - strand at 739.912 kb on + strand at 739.921 kb on - strand at 739.921 kb on - strand at 739.923 kb on + strand at 739.924 kb on - strand at 739.967 kb on + strand at 739.967 kb on + strand at 739.967 kb on + strand at 739.968 kb on - strand at 740.010 kb on + strand at 740.014 kb on + strand at 740.014 kb on + strand at 740.014 kb on + strand at 740.014 kb on + strand at 740.014 kb on + strand at 740.015 kb on - strand at 740.068 kb on + strand at 740.068 kb on + strand at 740.069 kb on - strand at 740.069 kb on - strand at 740.069 kb on - strand at 740.112 kb on + strand at 740.113 kb on - strand at 740.167 kb on + strand at 740.168 kb on - strand at 740.168 kb on - strand at 740.244 kb on + strand at 740.306 kb on - strand at 740.306 kb on - strand at 740.306 kb on - strand at 740.321 kb on - strand at 740.332 kb on + strand at 740.332 kb on + strand at 740.333 kb on - strand at 740.333 kb on - strand at 740.333 kb on - strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.505 kb on + strand, within AO353_03465 at 740.505 kb on + strand, within AO353_03465 at 740.505 kb on + strand, within AO353_03465 at 740.506 kb on - strand, within AO353_03465 at 740.506 kb on - strand, within AO353_03465 at 740.512 kb on - strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.536 kb on - strand, within AO353_03465 at 740.536 kb on - strand, within AO353_03465 at 740.536 kb on - strand, within AO353_03465 at 740.536 kb on - strand, within AO353_03465 at 740.536 kb on - strand, within AO353_03465 at 740.595 kb on + strand, within AO353_03465 at 740.596 kb on - strand, within AO353_03465 at 740.603 kb on - strand, within AO353_03465 at 740.603 kb on - strand, within AO353_03465 at 740.603 kb on - strand, within AO353_03465 at 740.625 kb on + strand, within AO353_03465 at 740.625 kb on + strand, within AO353_03465 at 740.655 kb on - strand, within AO353_03465 at 740.655 kb on - strand, within AO353_03465
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 738,642 + AO353_03455 0.82 -1.1 738,642 + AO353_03455 0.82 -1.7 738,643 - AO353_03455 0.82 -2.1 738,643 - AO353_03455 0.82 -0.4 738,643 - AO353_03455 0.82 +1.7 738,643 - AO353_03455 0.82 -1.1 738,643 - AO353_03455 0.82 -0.7 738,643 - AO353_03455 0.82 -1.7 738,643 - AO353_03455 0.82 -2.1 738,643 - AO353_03455 0.82 -1.1 738,643 - AO353_03455 0.82 +1.5 738,643 - AO353_03455 0.82 -2.1 738,807 + -1.1 738,808 - +3.9 738,808 - -1.1 738,820 - -0.1 738,967 - -0.5 738,967 - -1.1 739,113 + AO353_03460 0.22 -2.4 739,113 + AO353_03460 0.22 -2.1 739,114 - AO353_03460 0.22 -0.1 739,114 - AO353_03460 0.22 -0.1 739,162 + AO353_03460 0.28 -0.2 739,345 - AO353_03460 0.49 -1.1 739,416 - AO353_03460 0.57 -1.1 739,454 + AO353_03460 0.61 -2.4 739,454 + AO353_03460 0.61 -2.1 739,454 + AO353_03460 0.61 +3.9 739,454 + AO353_03460 0.61 +1.4 739,454 + AO353_03460 0.61 +2.3 739,454 + AO353_03460 0.61 +0.2 739,454 + AO353_03460 0.61 -0.1 739,604 + AO353_03460 0.79 -0.5 739,605 - AO353_03460 0.79 -1.1 739,605 - AO353_03460 0.79 -2.1 739,605 - AO353_03460 0.79 +0.5 739,605 - AO353_03460 0.79 -0.1 739,605 - AO353_03460 0.79 +0.5 739,618 + AO353_03460 0.80 -0.1 739,618 + AO353_03460 0.80 +1.2 739,619 - AO353_03460 0.81 +1.5 739,633 + AO353_03460 0.82 +0.2 739,755 + -2.4 739,755 + -1.1 739,756 - -0.1 739,767 + +2.1 739,768 - -0.1 739,834 + -1.1 739,834 + -1.1 739,834 + -2.2 739,834 + -0.7 739,834 + +0.3 739,834 + -0.1 739,835 - -2.4 739,835 - -1.6 739,835 - +1.5 739,835 - -1.1 739,835 - -1.6 739,835 - -2.6 739,878 - +2.3 739,878 - -0.5 739,896 + -0.1 739,897 - -1.6 739,897 - +2.6 739,897 - -1.6 739,897 - -0.1 739,900 + -2.1 739,900 + -0.1 739,901 - +1.1 739,912 + +0.9 739,921 - -1.6 739,921 - -1.1 739,923 + +3.1 739,924 - -2.1 739,967 + +0.4 739,967 + +0.9 739,967 + +1.5 739,968 - +0.9 740,010 + -0.1 740,014 + +0.4 740,014 + -0.1 740,014 + +0.7 740,014 + -1.1 740,014 + -0.1 740,015 - -0.1 740,068 + -0.1 740,068 + -2.1 740,069 - +3.4 740,069 - +0.9 740,069 - +0.5 740,112 + +3.3 740,113 - -0.1 740,167 + -1.1 740,168 - -1.1 740,168 - -0.1 740,244 + -0.1 740,306 - -1.6 740,306 - -0.1 740,306 - +1.1 740,321 - -1.1 740,332 + -0.1 740,332 + -0.5 740,333 - -0.2 740,333 - +1.9 740,333 - -0.6 740,335 + +1.5 740,335 + +1.9 740,335 + +1.5 740,335 + -2.1 740,335 + -1.5 740,335 + -1.6 740,335 + +0.8 740,335 + -1.1 740,335 + -2.6 740,335 + -1.6 740,335 + -0.8 740,335 + -0.1 740,335 + -2.1 740,335 + -2.1 740,336 - -1.1 740,336 - -0.6 740,336 - +0.4 740,336 - -2.4 740,336 - +1.3 740,336 - -1.1 740,336 - +1.6 740,336 - -1.1 740,336 - -0.1 740,336 - -2.1 740,505 + AO353_03465 0.16 +0.3 740,505 + AO353_03465 0.16 -1.1 740,505 + AO353_03465 0.16 -0.1 740,506 - AO353_03465 0.16 +1.6 740,506 - AO353_03465 0.16 -0.1 740,512 - AO353_03465 0.16 -0.6 740,535 + AO353_03465 0.18 -1.1 740,535 + AO353_03465 0.18 -2.6 740,535 + AO353_03465 0.18 +3.1 740,535 + AO353_03465 0.18 +1.3 740,535 + AO353_03465 0.18 -0.1 740,535 + AO353_03465 0.18 +0.9 740,535 + AO353_03465 0.18 -2.1 740,535 + AO353_03465 0.18 -1.9 740,535 + AO353_03465 0.18 -3.4 740,535 + AO353_03465 0.18 +0.8 740,536 - AO353_03465 0.18 -0.1 740,536 - AO353_03465 0.18 -0.1 740,536 - AO353_03465 0.18 -0.1 740,536 - AO353_03465 0.18 +0.5 740,536 - AO353_03465 0.18 -1.1 740,595 + AO353_03465 0.22 -2.4 740,596 - AO353_03465 0.22 +2.6 740,603 - AO353_03465 0.22 -0.1 740,603 - AO353_03465 0.22 +0.7 740,603 - AO353_03465 0.22 +0.5 740,625 + AO353_03465 0.24 +0.0 740,625 + AO353_03465 0.24 +0.7 740,655 - AO353_03465 0.26 -0.1 740,655 - AO353_03465 0.26 -1.2
Or see this region's nucleotide sequence