Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03165 and AO353_03170 are separated by 227 nucleotides AO353_03170 and AO353_03175 are separated by 43 nucleotides AO353_03175 and AO353_03180 are separated by 37 nucleotides
AO353_03165: AO353_03165 - magnesium transporter CorA, at 675,455 to 676,477
_03165
AO353_03170: AO353_03170 - nuclease PIN, at 676,705 to 678,321
_03170
AO353_03175: AO353_03175 - hypothetical protein, at 678,365 to 678,877
_03175
AO353_03180: AO353_03180 - transcriptional regulator, at 678,915 to 679,811
_03180
Position (kb) 676
677
678
679 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 676.472 kb on + strand at 676.473 kb on - strand at 676.475 kb on + strand at 676.475 kb on + strand at 676.476 kb on - strand at 676.476 kb on - strand at 676.476 kb on - strand at 676.487 kb on + strand at 676.487 kb on + strand at 676.487 kb on + strand at 676.488 kb on - strand at 676.488 kb on - strand at 676.488 kb on - strand at 676.488 kb on - strand at 676.488 kb on - strand at 676.494 kb on + strand at 676.494 kb on + strand at 676.494 kb on + strand at 676.578 kb on + strand at 676.578 kb on + strand at 676.578 kb on + strand at 676.578 kb on + strand at 676.584 kb on + strand at 676.585 kb on - strand at 676.585 kb on - strand at 676.585 kb on - strand at 676.649 kb on + strand at 676.650 kb on - strand at 676.650 kb on - strand at 676.710 kb on + strand at 676.784 kb on + strand at 676.784 kb on + strand at 676.784 kb on + strand at 676.784 kb on + strand at 676.784 kb on + strand at 676.785 kb on - strand at 676.785 kb on - strand at 676.788 kb on + strand at 676.789 kb on - strand at 676.840 kb on + strand at 676.904 kb on + strand, within AO353_03170 at 676.904 kb on + strand, within AO353_03170 at 676.990 kb on + strand, within AO353_03170 at 676.990 kb on + strand, within AO353_03170 at 676.990 kb on + strand, within AO353_03170 at 676.990 kb on + strand, within AO353_03170 at 676.990 kb on + strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 676.991 kb on - strand, within AO353_03170 at 677.419 kb on + strand, within AO353_03170 at 677.420 kb on - strand, within AO353_03170 at 677.420 kb on - strand, within AO353_03170 at 677.420 kb on - strand, within AO353_03170 at 677.707 kb on + strand, within AO353_03170 at 677.708 kb on - strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.848 kb on + strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand, within AO353_03170 at 677.849 kb on - strand at 678.079 kb on + strand, within AO353_03170 at 678.079 kb on + strand, within AO353_03170 at 678.079 kb on + strand, within AO353_03170 at 678.079 kb on + strand, within AO353_03170 at 678.079 kb on + strand, within AO353_03170 at 678.080 kb on - strand, within AO353_03170 at 678.080 kb on - strand, within AO353_03170 at 678.080 kb on - strand, within AO353_03170 at 678.295 kb on + strand at 678.295 kb on + strand at 678.296 kb on - strand at 678.335 kb on + strand at 678.335 kb on + strand at 678.336 kb on - strand at 678.336 kb on - strand at 678.378 kb on + strand at 678.378 kb on + strand at 678.378 kb on + strand at 678.378 kb on + strand at 678.378 kb on + strand at 678.378 kb on + strand at 678.379 kb on - strand at 678.379 kb on - strand at 678.433 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.686 kb on + strand, within AO353_03175 at 678.687 kb on - strand, within AO353_03175 at 678.687 kb on - strand, within AO353_03175 at 678.687 kb on - strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.725 kb on + strand, within AO353_03175 at 678.751 kb on - strand, within AO353_03175 at 678.751 kb on - strand, within AO353_03175 at 678.777 kb on + strand, within AO353_03175 at 678.777 kb on + strand, within AO353_03175 at 678.863 kb on + strand at 678.863 kb on + strand at 678.863 kb on + strand at 678.864 kb on - strand at 678.864 kb on - strand at 678.891 kb on - strand at 678.909 kb on + strand at 678.909 kb on + strand at 678.909 kb on + strand at 678.909 kb on + strand at 678.909 kb on + strand at 678.909 kb on + strand at 678.910 kb on - strand at 678.910 kb on - strand at 678.910 kb on - strand at 678.910 kb on - strand at 678.970 kb on - strand at 678.994 kb on + strand at 678.994 kb on + strand at 678.995 kb on - strand at 678.995 kb on - strand at 679.066 kb on + strand, within AO353_03180 at 679.066 kb on + strand, within AO353_03180 at 679.067 kb on - strand, within AO353_03180 at 679.129 kb on + strand, within AO353_03180 at 679.140 kb on - strand, within AO353_03180 at 679.142 kb on + strand, within AO353_03180 at 679.142 kb on + strand, within AO353_03180 at 679.142 kb on + strand, within AO353_03180 at 679.142 kb on + strand, within AO353_03180 at 679.198 kb on + strand, within AO353_03180 at 679.198 kb on + strand, within AO353_03180 at 679.198 kb on + strand, within AO353_03180 at 679.198 kb on + strand, within AO353_03180 at 679.199 kb on - strand, within AO353_03180 at 679.199 kb on - strand, within AO353_03180 at 679.199 kb on - strand, within AO353_03180 at 679.228 kb on - strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.237 kb on + strand, within AO353_03180 at 679.238 kb on - strand, within AO353_03180 at 679.238 kb on - strand, within AO353_03180 at 679.238 kb on - strand, within AO353_03180 at 679.238 kb on - strand, within AO353_03180 at 679.238 kb on - strand, within AO353_03180 at 679.289 kb on - strand, within AO353_03180 at 679.301 kb on - strand, within AO353_03180 at 679.301 kb on - strand, within AO353_03180
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 676,472 + -0.1 676,473 - -1.1 676,475 + +0.7 676,475 + +0.4 676,476 - +1.4 676,476 - -1.1 676,476 - -2.1 676,487 + -1.6 676,487 + +1.9 676,487 + +2.3 676,488 - -1.1 676,488 - -1.6 676,488 - -1.6 676,488 - -0.1 676,488 - +0.5 676,494 + -1.1 676,494 + +0.1 676,494 + +1.5 676,578 + -0.4 676,578 + -0.6 676,578 + -1.1 676,578 + -1.8 676,584 + -1.1 676,585 - -1.8 676,585 - -0.3 676,585 - +0.9 676,649 + +0.2 676,650 - -0.1 676,650 - -2.6 676,710 + -0.1 676,784 + +0.4 676,784 + +0.9 676,784 + -0.6 676,784 + -2.6 676,784 + -2.4 676,785 - -1.1 676,785 - +1.4 676,788 + -1.2 676,789 - -1.6 676,840 + +1.1 676,904 + AO353_03170 0.12 -1.6 676,904 + AO353_03170 0.12 +0.7 676,990 + AO353_03170 0.18 -2.1 676,990 + AO353_03170 0.18 +0.5 676,990 + AO353_03170 0.18 +2.3 676,990 + AO353_03170 0.18 -2.6 676,990 + AO353_03170 0.18 +3.3 676,991 - AO353_03170 0.18 -2.1 676,991 - AO353_03170 0.18 +1.4 676,991 - AO353_03170 0.18 -1.6 676,991 - AO353_03170 0.18 +0.5 676,991 - AO353_03170 0.18 +0.4 676,991 - AO353_03170 0.18 -1.9 677,419 + AO353_03170 0.44 +1.5 677,420 - AO353_03170 0.44 -1.1 677,420 - AO353_03170 0.44 -1.4 677,420 - AO353_03170 0.44 -2.1 677,707 + AO353_03170 0.62 -1.6 677,708 - AO353_03170 0.62 -0.1 677,848 + AO353_03170 0.71 -2.1 677,848 + -0.1 677,848 + AO353_03170 0.71 -0.1 677,848 + AO353_03170 0.71 -2.1 677,848 + AO353_03170 0.71 -2.4 677,848 + AO353_03170 0.71 +0.3 677,848 + AO353_03170 0.71 -0.1 677,848 + AO353_03170 0.71 +1.2 677,848 + AO353_03170 0.71 -2.1 677,848 + AO353_03170 0.71 -1.1 677,848 + AO353_03170 0.71 -1.3 677,848 + AO353_03170 0.71 +0.3 677,848 + AO353_03170 0.71 +3.1 677,848 + AO353_03170 0.71 -2.1 677,849 - AO353_03170 0.71 +0.9 677,849 - AO353_03170 0.71 +0.8 677,849 - AO353_03170 0.71 -0.1 677,849 - AO353_03170 0.71 +1.5 677,849 - AO353_03170 0.71 -1.1 677,849 - AO353_03170 0.71 -1.6 677,849 - AO353_03170 0.71 -0.1 677,849 - AO353_03170 0.71 +1.6 677,849 - AO353_03170 0.71 -2.1 677,849 - AO353_03170 0.71 +1.7 677,849 - +2.3 678,079 + AO353_03170 0.85 +1.5 678,079 + AO353_03170 0.85 +1.5 678,079 + AO353_03170 0.85 +1.3 678,079 + AO353_03170 0.85 -0.1 678,079 + AO353_03170 0.85 -0.5 678,080 - AO353_03170 0.85 +1.7 678,080 - AO353_03170 0.85 +0.1 678,080 - AO353_03170 0.85 -1.6 678,295 + +0.4 678,295 + +0.3 678,296 - -2.4 678,335 + -2.1 678,335 + +1.7 678,336 - +0.5 678,336 - -1.6 678,378 + -0.1 678,378 + -1.6 678,378 + +1.7 678,378 + -0.1 678,378 + -2.9 678,378 + -1.6 678,379 - -1.6 678,379 - -1.1 678,433 + AO353_03175 0.13 -2.4 678,686 + AO353_03175 0.63 +0.3 678,686 + AO353_03175 0.63 +0.2 678,686 + AO353_03175 0.63 -1.1 678,686 + AO353_03175 0.63 +2.5 678,686 + AO353_03175 0.63 -0.5 678,686 + AO353_03175 0.63 +0.9 678,687 - AO353_03175 0.63 -0.1 678,687 - AO353_03175 0.63 +0.9 678,687 - AO353_03175 0.63 -2.4 678,725 + AO353_03175 0.70 -0.4 678,725 + AO353_03175 0.70 +1.2 678,725 + AO353_03175 0.70 +2.9 678,725 + AO353_03175 0.70 -2.4 678,725 + AO353_03175 0.70 -1.1 678,725 + AO353_03175 0.70 +3.0 678,725 + AO353_03175 0.70 +0.3 678,751 - AO353_03175 0.75 -2.1 678,751 - AO353_03175 0.75 -1.6 678,777 + AO353_03175 0.80 -0.4 678,777 + AO353_03175 0.80 -2.1 678,863 + -2.1 678,863 + -0.1 678,863 + +2.5 678,864 - +2.3 678,864 - -2.1 678,891 - +1.7 678,909 + +0.6 678,909 + -0.8 678,909 + +2.6 678,909 + +2.7 678,909 + -1.5 678,909 + +1.4 678,910 - -1.2 678,910 - +1.2 678,910 - -1.6 678,910 - -2.1 678,970 - -1.1 678,994 + -0.1 678,994 + -1.1 678,995 - +1.0 678,995 - -0.1 679,066 + AO353_03180 0.17 +0.5 679,066 + AO353_03180 0.17 -0.3 679,067 - AO353_03180 0.17 +1.6 679,129 + AO353_03180 0.24 +2.3 679,140 - AO353_03180 0.25 +2.1 679,142 + AO353_03180 0.25 +1.5 679,142 + AO353_03180 0.25 -2.6 679,142 + AO353_03180 0.25 +1.9 679,142 + AO353_03180 0.25 -2.1 679,198 + AO353_03180 0.32 +0.9 679,198 + AO353_03180 0.32 +0.3 679,198 + AO353_03180 0.32 -0.1 679,198 + AO353_03180 0.32 -0.1 679,199 - AO353_03180 0.32 -1.6 679,199 - AO353_03180 0.32 -0.1 679,199 - AO353_03180 0.32 -0.9 679,228 - AO353_03180 0.35 -2.9 679,237 + AO353_03180 0.36 -0.1 679,237 + AO353_03180 0.36 -0.4 679,237 + AO353_03180 0.36 +1.8 679,237 + AO353_03180 0.36 -1.1 679,237 + AO353_03180 0.36 -1.6 679,237 + AO353_03180 0.36 +2.4 679,238 - AO353_03180 0.36 +0.9 679,238 - AO353_03180 0.36 -0.5 679,238 - AO353_03180 0.36 -0.1 679,238 - AO353_03180 0.36 -2.6 679,238 - AO353_03180 0.36 -0.1 679,289 - AO353_03180 0.42 -1.6 679,301 - AO353_03180 0.43 +1.7 679,301 - AO353_03180 0.43 +1.5
Or see this region's nucleotide sequence