Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02380 and AO353_02385 are separated by 91 nucleotides AO353_02385 and AO353_02390 are separated by 230 nucleotides AO353_02390 and AO353_02395 are separated by 394 nucleotides
AO353_02380: AO353_02380 - cell division topological specificity factor, at 506,004 to 506,258
_02380
AO353_02385: AO353_02385 - pseudouridine synthase, at 506,350 to 506,985
_02385
AO353_02390: AO353_02390 - aminopeptidase, at 507,216 to 508,505
_02390
AO353_02395: AO353_02395 - mechanosensitive ion channel protein, at 508,900 to 511,056
_02395
Position (kb) 507
508
509 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 506.335 kb on + strand at 506.335 kb on + strand at 506.348 kb on + strand at 506.348 kb on + strand at 506.349 kb on - strand at 506.393 kb on + strand at 506.393 kb on + strand at 506.412 kb on + strand at 506.413 kb on - strand at 506.614 kb on + strand, within AO353_02385 at 506.615 kb on - strand, within AO353_02385 at 506.867 kb on - strand, within AO353_02385 at 506.983 kb on + strand at 506.984 kb on - strand at 506.991 kb on - strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 507.056 kb on + strand at 507.056 kb on + strand at 507.168 kb on + strand at 507.169 kb on - strand at 507.179 kb on + strand at 507.179 kb on + strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.184 kb on + strand at 507.185 kb on - strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.212 kb on - strand at 507.212 kb on - strand at 507.212 kb on - strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.266 kb on + strand at 507.369 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.408 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.540 kb on + strand, within AO353_02390 at 507.541 kb on - strand, within AO353_02390 at 507.787 kb on + strand, within AO353_02390 at 507.788 kb on - strand, within AO353_02390 at 507.788 kb on - strand, within AO353_02390 at 507.843 kb on + strand, within AO353_02390 at 507.859 kb on - strand, within AO353_02390 at 507.940 kb on - strand, within AO353_02390 at 507.940 kb on - strand, within AO353_02390 at 508.150 kb on + strand, within AO353_02390 at 508.150 kb on + strand, within AO353_02390 at 508.150 kb on + strand, within AO353_02390 at 508.150 kb on + strand, within AO353_02390 at 508.150 kb on + strand, within AO353_02390 at 508.151 kb on - strand, within AO353_02390 at 508.151 kb on - strand, within AO353_02390 at 508.151 kb on - strand, within AO353_02390 at 508.151 kb on - strand, within AO353_02390 at 508.161 kb on + strand, within AO353_02390 at 508.161 kb on + strand, within AO353_02390 at 508.161 kb on + strand, within AO353_02390 at 508.161 kb on + strand, within AO353_02390 at 508.161 kb on + strand, within AO353_02390 at 508.162 kb on - strand, within AO353_02390 at 508.162 kb on - strand, within AO353_02390 at 508.162 kb on - strand, within AO353_02390 at 508.162 kb on - strand, within AO353_02390 at 508.378 kb on + strand at 508.482 kb on + strand at 508.483 kb on - strand at 508.550 kb on + strand at 508.609 kb on + strand at 508.609 kb on + strand at 508.609 kb on + strand at 508.609 kb on + strand at 508.609 kb on + strand at 508.609 kb on + strand at 508.610 kb on - strand at 508.610 kb on - strand at 508.610 kb on - strand at 508.610 kb on - strand at 508.610 kb on - strand at 508.615 kb on + strand at 508.615 kb on + strand at 508.615 kb on + strand at 508.615 kb on + strand at 508.615 kb on + strand at 508.615 kb on + strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.819 kb on + strand at 508.820 kb on - strand at 508.820 kb on - strand at 508.820 kb on - strand at 508.860 kb on + strand at 508.860 kb on + strand at 508.861 kb on - strand at 508.861 kb on - strand at 508.861 kb on - strand at 508.929 kb on + strand at 508.929 kb on + strand at 508.929 kb on + strand at 508.930 kb on - strand at 509.168 kb on + strand, within AO353_02395 at 509.169 kb on - strand, within AO353_02395 at 509.466 kb on + strand, within AO353_02395 at 509.466 kb on + strand, within AO353_02395 at 509.466 kb on + strand, within AO353_02395 at 509.466 kb on + strand, within AO353_02395 at 509.467 kb on - strand, within AO353_02395 at 509.467 kb on - strand, within AO353_02395 at 509.499 kb on + strand, within AO353_02395 at 509.500 kb on - strand, within AO353_02395 at 509.500 kb on - strand, within AO353_02395 at 509.500 kb on - strand, within AO353_02395 at 509.500 kb on - strand, within AO353_02395
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 506,335 + +1.3 506,335 + +1.3 506,348 + +0.6 506,348 + +1.0 506,349 - -1.1 506,393 + -1.1 506,393 + -1.8 506,412 + +3.5 506,413 - +0.9 506,614 + AO353_02385 0.42 -1.7 506,615 - AO353_02385 0.42 +1.7 506,867 - AO353_02385 0.81 -1.1 506,983 + +0.8 506,984 - +0.6 506,991 - -2.1 506,993 + -1.7 506,993 + +1.3 506,993 + +0.6 506,993 + -1.7 506,993 + +1.6 506,993 + -0.1 506,993 + -0.9 506,993 + +0.2 506,994 - -0.1 506,994 - +0.6 506,994 - +3.0 506,994 - +0.5 506,994 - +0.8 506,994 - +0.5 506,994 - +0.0 507,056 + -1.1 507,056 + +0.1 507,168 + -1.7 507,169 - -3.1 507,179 + -0.1 507,179 + -0.1 507,180 - +2.1 507,180 - -0.1 507,180 - -2.7 507,180 - -1.7 507,180 - -2.7 507,184 + +0.6 507,185 - -2.1 507,211 + -1.7 507,211 + -1.7 507,211 + +0.9 507,211 + -1.7 507,211 + -1.7 507,211 + +0.6 507,212 - -3.6 507,212 - +0.2 507,212 - -1.1 507,215 + +0.2 507,215 + -1.1 507,215 + -2.1 507,215 + -1.4 507,215 + -1.7 507,216 - -3.1 507,216 - -2.9 507,216 - -2.1 507,216 - -1.7 507,216 - -2.1 507,216 - -1.1 507,266 + +0.0 507,369 + AO353_02390 0.12 -2.1 507,372 + AO353_02390 0.12 -1.7 507,372 + AO353_02390 0.12 +1.7 507,372 + AO353_02390 0.12 -1.1 507,372 + AO353_02390 0.12 -2.1 507,372 + AO353_02390 0.12 -0.1 507,372 + AO353_02390 0.12 -1.7 507,372 + AO353_02390 0.12 -1.1 507,372 + AO353_02390 0.12 -2.1 507,373 - AO353_02390 0.12 -0.1 507,373 - AO353_02390 0.12 -1.7 507,373 - AO353_02390 0.12 -2.1 507,373 - AO353_02390 0.12 -2.1 507,373 - AO353_02390 0.12 -0.9 507,373 - AO353_02390 0.12 +0.9 507,373 - AO353_02390 0.12 -2.9 507,373 - AO353_02390 0.12 -1.1 507,408 + AO353_02390 0.15 -2.1 507,432 + AO353_02390 0.17 +1.3 507,432 + AO353_02390 0.17 -1.7 507,432 + AO353_02390 0.17 +1.3 507,432 + AO353_02390 0.17 -1.1 507,432 + AO353_02390 0.17 -2.1 507,432 + AO353_02390 0.17 -2.4 507,432 + AO353_02390 0.17 -2.4 507,432 + AO353_02390 0.17 -2.7 507,433 - AO353_02390 0.17 -2.9 507,433 - AO353_02390 0.17 -2.1 507,433 - AO353_02390 0.17 -3.4 507,433 - AO353_02390 0.17 -1.1 507,433 - AO353_02390 0.17 -2.4 507,433 - AO353_02390 0.17 -2.7 507,433 - AO353_02390 0.17 -2.1 507,433 - AO353_02390 0.17 -1.1 507,433 - AO353_02390 0.17 -1.1 507,540 + AO353_02390 0.25 -2.1 507,541 - AO353_02390 0.25 -1.7 507,787 + AO353_02390 0.44 -0.1 507,788 - AO353_02390 0.44 -1.1 507,788 - AO353_02390 0.44 -2.1 507,843 + AO353_02390 0.49 -0.1 507,859 - AO353_02390 0.50 -0.1 507,940 - AO353_02390 0.56 -1.7 507,940 - AO353_02390 0.56 -2.1 508,150 + AO353_02390 0.72 -2.4 508,150 + AO353_02390 0.72 -1.7 508,150 + AO353_02390 0.72 -1.7 508,150 + AO353_02390 0.72 -3.3 508,150 + AO353_02390 0.72 -2.1 508,151 - AO353_02390 0.72 -2.1 508,151 - AO353_02390 0.72 -3.9 508,151 - AO353_02390 0.72 -2.1 508,151 - AO353_02390 0.72 -2.4 508,161 + AO353_02390 0.73 -2.1 508,161 + AO353_02390 0.73 -1.7 508,161 + AO353_02390 0.73 -1.7 508,161 + AO353_02390 0.73 -0.1 508,161 + AO353_02390 0.73 -2.7 508,162 - AO353_02390 0.73 -2.4 508,162 - AO353_02390 0.73 +0.1 508,162 - AO353_02390 0.73 -2.3 508,162 - AO353_02390 0.73 -0.1 508,378 + -2.7 508,482 + -1.7 508,483 - -2.1 508,550 + +1.5 508,609 + +0.7 508,609 + +1.0 508,609 + -0.5 508,609 + -0.1 508,609 + -2.1 508,609 + +2.5 508,610 - -1.7 508,610 - -0.1 508,610 - -1.1 508,610 - -1.7 508,610 - +1.2 508,615 + -0.1 508,615 + +1.5 508,615 + +1.5 508,615 + -0.7 508,615 + +3.2 508,615 + +0.9 508,616 - -1.1 508,616 - -1.7 508,616 - -0.1 508,616 - +2.2 508,616 - -1.1 508,616 - -0.1 508,616 - -1.1 508,616 - -1.1 508,616 - -2.1 508,616 - -1.7 508,616 - -0.1 508,616 - -2.4 508,616 - +0.6 508,616 - -1.1 508,616 - -2.1 508,616 - +1.0 508,616 - -0.1 508,616 - -0.1 508,616 - -0.1 508,616 - -2.1 508,616 - -1.1 508,616 - -1.1 508,616 - -0.1 508,616 - +0.3 508,616 - +0.0 508,616 - +1.1 508,616 - -0.7 508,819 + -1.1 508,820 - -1.1 508,820 - -0.1 508,820 - -2.4 508,860 + +1.0 508,860 + -2.4 508,861 - -1.1 508,861 - -0.1 508,861 - -1.9 508,929 + -0.3 508,929 + +1.5 508,929 + +1.5 508,930 - -0.1 509,168 + AO353_02395 0.12 -1.1 509,169 - AO353_02395 0.12 -2.4 509,466 + AO353_02395 0.26 -2.7 509,466 + AO353_02395 0.26 -1.1 509,466 + AO353_02395 0.26 +0.9 509,466 + AO353_02395 0.26 +2.2 509,467 - AO353_02395 0.26 -0.1 509,467 - AO353_02395 0.26 -0.4 509,499 + AO353_02395 0.28 +1.6 509,500 - AO353_02395 0.28 -3.3 509,500 - AO353_02395 0.28 -0.7 509,500 - AO353_02395 0.28 -0.1 509,500 - AO353_02395 0.28 +1.1
Or see this region's nucleotide sequence