Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21420 and ABZR86_RS21425 are separated by 13 nucleotides ABZR86_RS21425 and ABZR86_RS21430 are separated by 4 nucleotides ABZR86_RS21430 and ABZR86_RS21435 are separated by 5 nucleotides ABZR86_RS21435 and ABZR86_RS21440 are separated by 516 nucleotides
ABZR86_RS21420: ABZR86_RS21420 - alpha/beta fold hydrolase, at 249,760 to 250,602
_RS21420
ABZR86_RS21425: ABZR86_RS21425 - EamA family transporter, at 250,616 to 250,981
_RS21425
ABZR86_RS21430: ABZR86_RS21430 - EamA family transporter, at 250,986 to 251,438
_RS21430
ABZR86_RS21435: ABZR86_RS21435 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 251,444 to 252,646
_RS21435
ABZR86_RS21440: ABZR86_RS21440 - hypothetical protein, at 253,163 to 254,758
_RS21440
Position (kb) 251
252
253 Strain fitness (log2 ratio) -2
-1
0
1 at 250.489 kb on + strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 251.668 kb on - strand, within ABZR86_RS21435 at 251.858 kb on + strand, within ABZR86_RS21435 at 251.972 kb on + strand, within ABZR86_RS21435 at 251.973 kb on - strand, within ABZR86_RS21435 at 251.973 kb on - strand, within ABZR86_RS21435 at 252.134 kb on + strand, within ABZR86_RS21435 at 252.135 kb on - strand, within ABZR86_RS21435 at 252.397 kb on + strand, within ABZR86_RS21435 at 252.397 kb on + strand, within ABZR86_RS21435 at 252.398 kb on - strand, within ABZR86_RS21435 at 252.398 kb on - strand, within ABZR86_RS21435 at 252.442 kb on - strand, within ABZR86_RS21435 at 252.495 kb on - strand, within ABZR86_RS21435 at 252.500 kb on + strand, within ABZR86_RS21435 at 252.657 kb on + strand at 253.164 kb on + strand at 253.165 kb on - strand at 253.201 kb on + strand at 253.202 kb on - strand at 253.234 kb on - strand at 253.246 kb on - strand at 253.246 kb on - strand at 253.246 kb on - strand at 253.290 kb on + strand at 253.398 kb on + strand, within ABZR86_RS21440 at 253.491 kb on + strand, within ABZR86_RS21440 at 253.509 kb on + strand, within ABZR86_RS21440 at 253.509 kb on + strand, within ABZR86_RS21440 at 253.510 kb on - strand, within ABZR86_RS21440 at 253.510 kb on - strand, within ABZR86_RS21440 at 253.525 kb on - strand, within ABZR86_RS21440 at 253.561 kb on - strand, within ABZR86_RS21440 at 253.561 kb on - strand, within ABZR86_RS21440
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 250,489 + ABZR86_RS21420 0.86 -1.8 250,490 - ABZR86_RS21420 0.87 -1.0 250,490 - ABZR86_RS21420 0.87 -1.6 250,490 - ABZR86_RS21420 0.87 -1.4 250,490 - ABZR86_RS21420 0.87 -1.1 250,490 - ABZR86_RS21420 0.87 -1.5 251,668 - ABZR86_RS21435 0.19 -0.9 251,858 + ABZR86_RS21435 0.34 -0.2 251,972 + ABZR86_RS21435 0.44 -0.4 251,973 - ABZR86_RS21435 0.44 -1.7 251,973 - ABZR86_RS21435 0.44 +0.4 252,134 + ABZR86_RS21435 0.57 -2.2 252,135 - ABZR86_RS21435 0.57 -0.4 252,397 + ABZR86_RS21435 0.79 -2.3 252,397 + ABZR86_RS21435 0.79 -1.8 252,398 - ABZR86_RS21435 0.79 -2.4 252,398 - ABZR86_RS21435 0.79 -1.4 252,442 - ABZR86_RS21435 0.83 -0.6 252,495 - ABZR86_RS21435 0.87 -0.2 252,500 + ABZR86_RS21435 0.88 -1.6 252,657 + -0.3 253,164 + +0.5 253,165 - +0.3 253,201 + -0.1 253,202 - +0.0 253,234 - -0.7 253,246 - -0.2 253,246 - -0.4 253,246 - -0.7 253,290 + +0.4 253,398 + ABZR86_RS21440 0.15 +0.4 253,491 + ABZR86_RS21440 0.21 -0.4 253,509 + ABZR86_RS21440 0.22 +0.5 253,509 + ABZR86_RS21440 0.22 -0.0 253,510 - ABZR86_RS21440 0.22 +0.2 253,510 - ABZR86_RS21440 0.22 -0.8 253,525 - ABZR86_RS21440 0.23 -0.1 253,561 - ABZR86_RS21440 0.25 +0.2 253,561 - ABZR86_RS21440 0.25 +0.6
Or see this region's nucleotide sequence