Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2659 and DvMF_2660 overlap by 4 nucleotides DvMF_2660 and DvMF_2661 are separated by 207 nucleotides
DvMF_2659: DvMF_2659 - cysteine desulfurase NifS (RefSeq), at 3,358,663 to 3,359,877
_2659
DvMF_2660: DvMF_2660 - Fe-S cluster assembly protein NifU (RefSeq), at 3,359,874 to 3,360,719
_2660
DvMF_2661: DvMF_2661 - metal dependent phosphohydrolase (RefSeq), at 3,360,927 to 3,361,910
_2661
Position (kb)
3359
3360
3361 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3358.895 kb on - strand, within DvMF_2659 at 3358.895 kb on - strand, within DvMF_2659 at 3359.095 kb on + strand, within DvMF_2659 at 3359.219 kb on - strand, within DvMF_2659 at 3359.252 kb on + strand, within DvMF_2659 at 3359.327 kb on - strand, within DvMF_2659 at 3359.516 kb on + strand, within DvMF_2659 at 3359.663 kb on + strand, within DvMF_2659 at 3359.687 kb on - strand, within DvMF_2659 at 3359.872 kb on + strand at 3359.941 kb on - strand at 3359.948 kb on - strand at 3360.162 kb on + strand, within DvMF_2660 at 3360.165 kb on - strand, within DvMF_2660 at 3360.475 kb on - strand, within DvMF_2660 at 3360.493 kb on + strand, within DvMF_2660 at 3360.515 kb on - strand, within DvMF_2660 at 3360.651 kb on - strand at 3360.919 kb on + strand at 3360.924 kb on + strand at 3360.927 kb on - strand at 3361.137 kb on + strand, within DvMF_2661 at 3361.225 kb on + strand, within DvMF_2661 at 3361.360 kb on - strand, within DvMF_2661 at 3361.360 kb on - strand, within DvMF_2661 at 3361.600 kb on + strand, within DvMF_2661 at 3361.637 kb on - strand, within DvMF_2661
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.0625 mg/ml remove 3,358,895 - DvMF_2659 0.19 +0.8 3,358,895 - DvMF_2659 0.19 -0.5 3,359,095 + DvMF_2659 0.36 +0.7 3,359,219 - DvMF_2659 0.46 +0.6 3,359,252 + DvMF_2659 0.48 -1.2 3,359,327 - DvMF_2659 0.55 +0.4 3,359,516 + DvMF_2659 0.70 -0.5 3,359,663 + DvMF_2659 0.82 -0.3 3,359,687 - DvMF_2659 0.84 +0.2 3,359,872 + -0.7 3,359,941 - +0.5 3,359,948 - +0.3 3,360,162 + DvMF_2660 0.34 -0.7 3,360,165 - DvMF_2660 0.34 +0.0 3,360,475 - DvMF_2660 0.71 +0.1 3,360,493 + DvMF_2660 0.73 +1.9 3,360,515 - DvMF_2660 0.76 -0.2 3,360,651 - +2.1 3,360,919 + -1.0 3,360,924 + -0.3 3,360,927 - -0.6 3,361,137 + DvMF_2661 0.21 -0.9 3,361,225 + DvMF_2661 0.30 -1.1 3,361,360 - DvMF_2661 0.44 -1.9 3,361,360 - DvMF_2661 0.44 -1.2 3,361,600 + DvMF_2661 0.68 -2.2 3,361,637 - DvMF_2661 0.72 -0.0
Or see this region's nucleotide sequence