Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2583
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,266,373 | + | DvMF_2582 | 0.47 | -0.1 | |
3,266,531 | - | DvMF_2582 | 0.62 | -0.7 | |
3,266,544 | + | DvMF_2582 | 0.63 | -0.3 | |
3,266,554 | - | DvMF_2582 | 0.64 | -0.7 | |
3,266,563 | + | DvMF_2582 | 0.65 | -0.1 | |
3,266,604 | + | DvMF_2582 | 0.69 | -0.1 | |
3,266,612 | - | DvMF_2582 | 0.70 | -0.8 | |
3,266,705 | - | DvMF_2582 | 0.78 | -0.8 | |
3,266,928 | + | +0.6 | |||
3,267,001 | - | -0.1 | |||
3,267,001 | - | -0.7 | |||
3,267,138 | - | -0.6 | |||
3,267,501 | - | DvMF_2583 | 0.22 | -2.5 | |
3,267,643 | - | DvMF_2583 | 0.45 | -0.4 | |
3,267,934 | + | -0.7 | |||
3,268,211 | - | -1.2 | |||
3,268,213 | + | -0.7 | |||
3,268,269 | + | DvMF_2584 | 0.11 | -0.2 | |
3,268,349 | - | DvMF_2584 | 0.14 | -0.3 | |
3,268,371 | - | DvMF_2584 | 0.15 | +0.1 | |
3,268,416 | + | DvMF_2584 | 0.16 | -0.3 | |
3,268,597 | + | DvMF_2584 | 0.24 | -1.2 | |
3,268,918 | - | DvMF_2584 | 0.36 | +0.0 |
Or see this region's nucleotide sequence