Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2523
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,180,851 | - | DvMF_2522 | 0.51 | -1.1 | |
3,180,851 | - | DvMF_2522 | 0.51 | -0.4 | |
3,180,851 | - | DvMF_2522 | 0.51 | -1.0 | |
3,181,045 | - | DvMF_2522 | 0.61 | -0.1 | |
3,181,319 | + | DvMF_2522 | 0.76 | -0.8 | |
3,181,464 | - | DvMF_2522 | 0.84 | -0.8 | |
3,181,507 | + | DvMF_2522 | 0.87 | -0.4 | |
3,181,555 | + | DvMF_2522 | 0.89 | -0.2 | |
3,181,645 | + | -0.2 | |||
3,181,752 | + | +0.2 | |||
3,181,803 | - | DvMF_2523 | 0.11 | -0.1 | |
3,181,919 | + | DvMF_2523 | 0.36 | +1.9 | |
3,182,027 | + | DvMF_2523 | 0.59 | +1.5 | |
3,182,040 | - | DvMF_2523 | 0.62 | +0.3 | |
3,182,373 | - | -0.0 | |||
3,182,393 | - | +1.9 | |||
3,182,472 | + | DvMF_2524 | 0.12 | +1.7 | |
3,182,480 | + | DvMF_2524 | 0.12 | +1.8 | |
3,182,672 | + | DvMF_2524 | 0.22 | +1.3 | |
3,183,072 | - | DvMF_2524 | 0.40 | +1.4 | |
3,183,108 | - | DvMF_2524 | 0.42 | +0.3 |
Or see this region's nucleotide sequence