Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2518
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,174,290 | + | DvMF_2517 | 0.53 | +1.3 | |
| 3,174,314 | + | DvMF_2517 | 0.56 | +1.1 | |
| 3,174,322 | - | DvMF_2517 | 0.57 | +0.4 | |
| 3,174,508 | + | DvMF_2517 | 0.81 | +1.1 | |
| 3,174,511 | - | DvMF_2517 | 0.81 | +0.7 | |
| 3,174,521 | - | DvMF_2517 | 0.82 | +0.3 | |
| 3,174,844 | + | -0.9 | |||
| 3,175,194 | + | flgG | DvMF_2518 | 0.30 | +1.3 |
| 3,175,290 | + | flgG | DvMF_2518 | 0.43 | +1.2 |
| 3,175,436 | - | flgG | DvMF_2518 | 0.61 | +0.5 |
| 3,175,554 | + | flgG | DvMF_2518 | 0.76 | +1.3 |
| 3,175,601 | - | flgG | DvMF_2518 | 0.82 | +0.4 |
| 3,175,887 | + | -0.7 | |||
| 3,175,901 | - | -1.1 | |||
| 3,176,013 | + | +0.7 | |||
| 3,176,168 | + | DvMF_2519 | 0.22 | +0.9 | |
| 3,176,189 | + | DvMF_2519 | 0.24 | +1.3 | |
| 3,176,371 | - | DvMF_2519 | 0.41 | -0.2 |
Or see this region's nucleotide sequence