Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2410
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,047,052 | + | DvMF_2409 | 0.71 | -0.4 | |
| 3,047,578 | + | -0.8 | |||
| 3,047,586 | - | -0.7 | |||
| 3,048,085 | - | DvMF_2410 | 0.12 | -0.6 | |
| 3,048,296 | + | DvMF_2410 | 0.23 | +0.1 | |
| 3,048,296 | + | DvMF_2410 | 0.23 | -1.4 | |
| 3,048,346 | + | DvMF_2410 | 0.26 | -1.6 | |
| 3,048,368 | - | DvMF_2410 | 0.27 | -1.0 | |
| 3,048,926 | + | DvMF_2410 | 0.55 | -1.7 | |
| 3,049,566 | + | DvMF_2410 | 0.87 | -0.7 | |
| 3,049,592 | + | DvMF_2410 | 0.88 | -2.6 | |
| 3,049,729 | + | -1.0 | |||
| 3,049,738 | + | -0.8 | |||
| 3,049,810 | + | -0.5 | |||
| 3,050,177 | - | DvMF_2411 | 0.25 | -0.4 | |
| 3,050,227 | + | DvMF_2411 | 0.29 | -0.2 | |
| 3,050,269 | - | DvMF_2411 | 0.32 | -1.2 | |
| 3,050,295 | + | DvMF_2411 | 0.34 | -0.2 | |
| 3,050,460 | + | DvMF_2411 | 0.47 | +0.3 | |
| 3,050,542 | + | DvMF_2411 | 0.53 | -0.2 | |
| 3,050,696 | + | DvMF_2411 | 0.64 | -1.3 |
Or see this region's nucleotide sequence