Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2300

Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Gentamicin 0.0625 mg/ml
2,887,635	+				-1.1
2,887,635	+				-0.0
2,887,643	-				+1.7
2,887,754	+		DvMF_2299	0.14	+0.1
2,887,782	-		DvMF_2299	0.16	-0.3
2,887,857	+		DvMF_2299	0.24	-0.2
2,888,127	-		DvMF_2299	0.51	-1.8
2,888,562	+				+0.4
2,888,562	+				+0.2
2,888,737	+				-0.2
2,888,772	-				-1.2
2,888,895	+		DvMF_2300	0.10	-0.2
2,889,011	+		DvMF_2300	0.14	+0.6
2,889,019	-		DvMF_2300	0.14	-0.4
2,889,032	+		DvMF_2300	0.15	-0.3
2,889,144	+		DvMF_2300	0.19	+0.3
2,889,223	+		DvMF_2300	0.22	+1.2
2,889,397	+		DvMF_2300	0.28	-0.9
2,889,770	-		DvMF_2300	0.41	-0.7
2,889,785	-		DvMF_2300	0.42	-0.9
2,889,785	-		DvMF_2300	0.42	-0.6
2,889,889	-		DvMF_2300	0.45	-0.3
2,890,014	-		DvMF_2300	0.50	-1.4
2,890,019	-		DvMF_2300	0.50	-0.3
2,890,044	+		DvMF_2300	0.51	-0.8
2,890,175	-		DvMF_2300	0.56	-1.1
2,890,571	+		DvMF_2300	0.70	-0.3
2,890,732	+		DvMF_2300	0.75	-0.7
2,890,765	+		DvMF_2300	0.77	+0.3
2,890,880	+		DvMF_2300	0.81	+0.2
2,890,888	+		DvMF_2300	0.81	-0.6
2,890,901	-		DvMF_2300	0.81	-0.9
2,891,074	+		DvMF_2300	0.88	-0.5
2,891,074	+		DvMF_2300	0.88	-0.9
2,891,074	+		DvMF_2300	0.88	-0.2
2,891,082	-		DvMF_2300	0.88	-0.7
2,891,082	-		DvMF_2300	0.88	-0.1
2,891,082	-		DvMF_2300	0.88	-0.2
2,891,082	-		DvMF_2300	0.88	-0.9
2,891,227	+				-0.4
2,891,235	-				-1.0
2,891,258	-				-1.8
2,891,308	+				-0.6
2,891,313	+				-0.6
2,891,346	-				-0.1
2,891,425	-				-4.0
2,891,432	+				-0.1
2,891,452	-				-2.3
2,891,457	-				-0.8
2,891,475	+				-0.5
2,891,475	+				-0.5
2,891,483	-				-0.5
2,891,483	-				-0.9
2,891,825	+				+0.0
2,891,830	+				-0.1
2,891,830	+				-0.0
2,891,830	+				-0.7
2,891,838	-				-1.4
2,891,840	+				-0.7
2,892,080	+		DvMF_2301	0.33	-0.4
2,892,186	+		DvMF_2301	0.54	-0.2
2,892,308	+		DvMF_2301	0.79	+0.4
2,892,320	+		DvMF_2301	0.82	-0.3
2,892,328	-		DvMF_2301	0.83	-0.5
2,892,328	-		DvMF_2301	0.83	-0.7