Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2194 and DvMF_2195 overlap by 4 nucleotides DvMF_2195 and DvMF_2196 are separated by 184 nucleotides
DvMF_2194: DvMF_2194 - permease (RefSeq), at 2,740,607 to 2,741,704
_2194
DvMF_2195: DvMF_2195 - hypothetical protein (RefSeq), at 2,741,701 to 2,742,951
_2195
DvMF_2196: DvMF_2196 - FAD linked oxidase domain protein (RefSeq), at 2,743,136 to 2,745,964
_2196
Position (kb)
2741
2742
2743 Strain fitness (log2 ratio)
-1
0
1 at 2740.793 kb on + strand, within DvMF_2194 at 2740.801 kb on - strand, within DvMF_2194 at 2740.823 kb on - strand, within DvMF_2194 at 2740.973 kb on + strand, within DvMF_2194 at 2741.199 kb on - strand, within DvMF_2194 at 2741.264 kb on - strand, within DvMF_2194 at 2741.282 kb on + strand, within DvMF_2194 at 2741.394 kb on + strand, within DvMF_2194 at 2741.394 kb on + strand, within DvMF_2194 at 2741.402 kb on - strand, within DvMF_2194 at 2741.402 kb on - strand, within DvMF_2194 at 2741.402 kb on - strand, within DvMF_2194 at 2741.402 kb on - strand, within DvMF_2194 at 2741.451 kb on - strand, within DvMF_2194 at 2741.543 kb on + strand, within DvMF_2194 at 2741.570 kb on + strand, within DvMF_2194 at 2741.693 kb on - strand at 2741.763 kb on + strand at 2741.771 kb on - strand at 2742.009 kb on + strand, within DvMF_2195 at 2742.397 kb on + strand, within DvMF_2195 at 2742.769 kb on + strand, within DvMF_2195 at 2742.769 kb on - strand, within DvMF_2195 at 2742.815 kb on + strand, within DvMF_2195 at 2742.823 kb on - strand, within DvMF_2195 at 2742.975 kb on + strand at 2743.030 kb on - strand at 2743.308 kb on - strand at 2743.687 kb on - strand, within DvMF_2196 at 2743.728 kb on - strand, within DvMF_2196 at 2743.901 kb on - strand, within DvMF_2196
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.0625 mg/ml remove 2,740,793 + DvMF_2194 0.17 +0.8 2,740,801 - DvMF_2194 0.18 -0.3 2,740,823 - DvMF_2194 0.20 -0.5 2,740,973 + DvMF_2194 0.33 -0.2 2,741,199 - DvMF_2194 0.54 -0.3 2,741,264 - DvMF_2194 0.60 -0.1 2,741,282 + DvMF_2194 0.61 +0.4 2,741,394 + DvMF_2194 0.72 -0.3 2,741,394 + DvMF_2194 0.72 -0.3 2,741,402 - DvMF_2194 0.72 -0.8 2,741,402 - DvMF_2194 0.72 -0.0 2,741,402 - DvMF_2194 0.72 -0.4 2,741,402 - DvMF_2194 0.72 -0.6 2,741,451 - DvMF_2194 0.77 -1.4 2,741,543 + DvMF_2194 0.85 -0.9 2,741,570 + DvMF_2194 0.88 -1.0 2,741,693 - +0.3 2,741,763 + -1.0 2,741,771 - -1.3 2,742,009 + DvMF_2195 0.25 -0.5 2,742,397 + DvMF_2195 0.56 -0.9 2,742,769 + DvMF_2195 0.85 -0.7 2,742,769 - DvMF_2195 0.85 -1.3 2,742,815 + DvMF_2195 0.89 -1.2 2,742,823 - DvMF_2195 0.90 +0.5 2,742,975 + -0.7 2,743,030 - -0.9 2,743,308 - -0.7 2,743,687 - DvMF_2196 0.19 -0.8 2,743,728 - DvMF_2196 0.21 -1.5 2,743,901 - DvMF_2196 0.27 -0.1
Or see this region's nucleotide sequence