Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2053

Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Gentamicin 0.0625 mg/ml
2,544,459	-				-0.5
2,544,490	-				-0.8
2,544,492	+				-0.1
2,544,500	-				-0.4
2,544,519	+				+0.1
2,544,572	-				+0.7
2,544,683	-				+1.0
2,544,771	-		DvMF_2052	0.19	+0.1
2,544,798	-		DvMF_2052	0.24	+0.9
2,544,826	-		DvMF_2052	0.29	+0.4
2,544,829	+		DvMF_2052	0.30	-0.6
2,544,837	-		DvMF_2052	0.31	-1.3
2,544,837	-		DvMF_2052	0.31	+0.5
2,544,931	-		DvMF_2052	0.48	+0.6
2,544,933	-		DvMF_2052	0.48	+0.3
2,544,966	-		DvMF_2052	0.54	+1.3
2,545,039	+		DvMF_2052	0.67	-1.0
2,545,047	-		DvMF_2052	0.68	+0.2
2,545,058	-		DvMF_2052	0.70	+0.7
2,545,233	-				+0.0
2,545,233	-				+0.4
2,545,233	-				+0.1
2,545,419	-				-0.5
2,545,427	+				-0.3
2,545,427	+				-0.5
2,545,613	+		DvMF_2053	0.14	-1.6
2,545,671	-		DvMF_2053	0.19	-4.2
2,545,730	+		DvMF_2053	0.24	-1.5
2,545,804	-		DvMF_2053	0.30	-0.3
2,545,897	-		DvMF_2053	0.37	-2.7
2,546,068	+		DvMF_2053	0.51	-2.6
2,546,136	-		DvMF_2053	0.56	-1.1
2,546,151	-		DvMF_2053	0.57	-3.5
2,546,158	+		DvMF_2053	0.58	-1.8
2,546,161	-		DvMF_2053	0.58	-1.7
2,546,196	+		DvMF_2053	0.61	-0.5
2,546,264	-		DvMF_2053	0.66	-1.4
2,546,287	-		DvMF_2053	0.68	-2.0
2,546,351	-		DvMF_2053	0.73	-1.9
2,546,450	+		DvMF_2053	0.81	-1.4
2,546,643	+				-2.5
2,546,794	-				-2.3
2,546,826	+				-1.1
2,547,084	+		DvMF_2054	0.20	-1.5
2,547,111	-		DvMF_2054	0.32	-0.8
2,547,178	+		DvMF_2054	0.60	-2.4
2,547,181	-		DvMF_2054	0.61	-2.8
2,547,189	-		DvMF_2054	0.64	+0.2
2,547,269	+				+1.0
2,547,269	-				-2.8
2,547,274	+				-1.8
2,547,425	+		DvMF_2055	0.13	+1.5