Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2022

Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Gentamicin 0.0625 mg/ml
2,503,362	+		DvMF_2021	0.50	+0.5
2,503,540	+		DvMF_2021	0.68	+0.6
2,503,649	+		DvMF_2021	0.80	-0.2
2,503,657	-		DvMF_2021	0.81	-0.7
2,503,668	+		DvMF_2021	0.82	+0.8
2,503,668	+		DvMF_2021	0.82	+0.2
2,503,668	+		DvMF_2021	0.82	+2.0
2,504,084	-				-1.1
2,504,114	-				-2.6
2,504,134	-				-4.3
2,504,335	-				-0.9
2,504,351	-				-0.5
2,504,359	-				+1.2
2,504,830	+		DvMF_2022	0.36	-1.0
2,505,013	-		DvMF_2022	0.46	-1.0
2,505,120	-		DvMF_2022	0.52	-0.8
2,505,181	+		DvMF_2022	0.55	-0.3
2,505,480	-		DvMF_2022	0.72	-0.8
2,505,591	+		DvMF_2022	0.78	-1.5
2,505,594	+		DvMF_2022	0.79	-0.9
2,505,921	+				-1.0
2,506,068	+				-0.4
2,506,071	-				-0.6
2,506,109	+				+0.3
2,506,195	+		DvMF_2023	0.22	-1.5
2,506,410	+		DvMF_2023	0.81	+0.8
2,506,430	+		DvMF_2023	0.86	-0.2
2,506,490	-				-1.0
2,506,804	-				-1.0
2,506,842	+				+0.0
2,506,863	-				-0.2