Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt 11789400 and 11504646 are separated by 0 nucleotides 11504646 and 11647009 overlap by 32 nucleotides 11647009 and 11789401 overlap by 32 nucleotides 11789401 and 11504647 are separated by 0 nucleotides 11504647 and 11647010 overlap by 33 nucleotides 11647010 and 11789402 overlap by 33 nucleotides 11789402 and 11504648 are separated by 0 nucleotides 11504648 and 11647011 overlap by 32 nucleotides 11647011 and 11789403 overlap by 32 nucleotides 11789403 and 11504649 are separated by 0 nucleotides 11504649 and 11647012 overlap by 34 nucleotides 11647012 and 11789404 overlap by 34 nucleotides 11789404 and 11504650 are separated by 0 nucleotides 11504650 and 11647013 overlap by 32 nucleotides 11647013 and 11789405 overlap by 32 nucleotides 11789405 and 11504651 are separated by 0 nucleotides 11504651 and 11647014 overlap by 34 nucleotides 11647014 and 11789406 overlap by 34 nucleotides 11789406 and 11504652 are separated by 0 nucleotides 11504652 and 11647015 overlap by 32 nucleotides 11647015 and 11789407 overlap by 32 nucleotides 11789407 and 11504653 are separated by 0 nucleotides 11504653 and 11647016 overlap by 34 nucleotides 11647016 and 11789408 overlap by 34 nucleotides 11789408 and 11504654 are separated by 0 nucleotides 11504654 and 11647017 overlap by 32 nucleotides 11647017 and 11789409 overlap by 32 nucleotides 11789409 and 11504655 are separated by 0 nucleotides 11504655 and 11647018 overlap by 34 nucleotides 11647018 and 11789410 overlap by 34 nucleotides 11789410 and 11504656 are separated by 0 nucleotides 11504656 and 11647019 overlap by 32 nucleotides 11647019 and 11789411 overlap by 32 nucleotides 11789411 and 11504657 are separated by 0 nucleotides 11504657 and 11647020 overlap by 34 nucleotides 11647020 and 11789412 overlap by 34 nucleotides 11789412 and 11504658 are separated by 0 nucleotides 11504658 and 11647021 overlap by 32 nucleotides 11647021 and 11789413 overlap by 32 nucleotides 11789413 and 11504659 are separated by 0 nucleotides 11504659 and 11647022 overlap by 34 nucleotides 11647022 and 11789414 overlap by 34 nucleotides 11789414 and 11504660 are separated by 0 nucleotides 11504660 and 11647023 overlap by 32 nucleotides 11647023 and 11789415 overlap by 32 nucleotides 11789415 and 11504661 are separated by 0 nucleotides 11504661 and 11647024 overlap by 36 nucleotides 11647024 and 11789416 overlap by 36 nucleotides 11789416 and 11504662 are separated by 0 nucleotides 11504662 and 11647025 overlap by 32 nucleotides 11647025 and 11789417 overlap by 32 nucleotides 11789417 and 11504663 are separated by 0 nucleotides 11504663 and 11647026 overlap by 35 nucleotides 11647026 and 11789418 overlap by 35 nucleotides 11789418 and 11504664 are separated by 0 nucleotides 11504664 and 11647027 overlap by 32 nucleotides 11647027 and 11789419 overlap by 32 nucleotides 11789419 and 11504665 are separated by 0 nucleotides 11504665 and 11647028 overlap by 34 nucleotides 11647028 and 11789420 overlap by 34 nucleotides 11789420 and 11504666 are separated by 0 nucleotides 11504666 and 11647029 overlap by 32 nucleotides 11647029 and 11789421 overlap by 32 nucleotides 11789421 and 11504667 are separated by 0 nucleotides 11504667 and 11647030 overlap by 34 nucleotides 11647030 and 11789422 overlap by 34 nucleotides 11789422 and 11504668 are separated by 0 nucleotides 11504668 and 11647031 overlap by 32 nucleotides 11647031 and 11789423 overlap by 32 nucleotides 11789423 and 11504669 are separated by 0 nucleotides 11504669 and 11647032 overlap by 33 nucleotides 11647032 and 11789424 overlap by 33 nucleotides 11789424 and 11504670 are separated by 0 nucleotides 11504670 and 11647033 overlap by 32 nucleotides 11647033 and 11789425 overlap by 32 nucleotides 11789425 and 11504671 are separated by 0 nucleotides 11504671 and 11647034 overlap by 31 nucleotides 11647034 and 11789426 overlap by 31 nucleotides 11789426 and 11504672 are separated by 0 nucleotides 11504672 and 11647035 overlap by 18 nucleotides 11647035 and 11789427 overlap by 18 nucleotides 11789427 and DvMF_1978 are separated by 119 nucleotides DvMF_1978 and DvMF_1979 are separated by 103 nucleotides DvMF_1979 and DvMF_1980 are separated by 273 nucleotides
11504645 - no description, at 2,447,229 to 2,447,263
11504645
11647008 - no description, at 2,447,229 to 2,447,263
11647008
11789400 - no description, at 2,447,229 to 2,447,263
11789400
11504646 - no description, at 2,447,264 to 2,447,295
11504646
11647009 - no description, at 2,447,264 to 2,447,295
11647009
11789401 - no description, at 2,447,264 to 2,447,295
11789401
11504647 - no description, at 2,447,296 to 2,447,328
11504647
11647010 - no description, at 2,447,296 to 2,447,328
11647010
11789402 - no description, at 2,447,296 to 2,447,328
11789402
11504648 - no description, at 2,447,329 to 2,447,360
11504648
11647011 - no description, at 2,447,329 to 2,447,360
11647011
11789403 - no description, at 2,447,329 to 2,447,360
11789403
11504649 - no description, at 2,447,361 to 2,447,394
11504649
11647012 - no description, at 2,447,361 to 2,447,394
11647012
11789404 - no description, at 2,447,361 to 2,447,394
11789404
11504650 - no description, at 2,447,395 to 2,447,426
11504650
11647013 - no description, at 2,447,395 to 2,447,426
11647013
11789405 - no description, at 2,447,395 to 2,447,426
11789405
11504651 - no description, at 2,447,427 to 2,447,460
11504651
11647014 - no description, at 2,447,427 to 2,447,460
11647014
11789406 - no description, at 2,447,427 to 2,447,460
11789406
11504652 - no description, at 2,447,461 to 2,447,492
11504652
11647015 - no description, at 2,447,461 to 2,447,492
11647015
11789407 - no description, at 2,447,461 to 2,447,492
11789407
11504653 - no description, at 2,447,493 to 2,447,526
11504653
11647016 - no description, at 2,447,493 to 2,447,526
11647016
11789408 - no description, at 2,447,493 to 2,447,526
11789408
11504654 - no description, at 2,447,527 to 2,447,558
11504654
11647017 - no description, at 2,447,527 to 2,447,558
11647017
11789409 - no description, at 2,447,527 to 2,447,558
11789409
11504655 - no description, at 2,447,559 to 2,447,592
11504655
11647018 - no description, at 2,447,559 to 2,447,592
11647018
11789410 - no description, at 2,447,559 to 2,447,592
11789410
11504656 - no description, at 2,447,593 to 2,447,624
11504656
11647019 - no description, at 2,447,593 to 2,447,624
11647019
11789411 - no description, at 2,447,593 to 2,447,624
11789411
11504657 - no description, at 2,447,625 to 2,447,658
11504657
11647020 - no description, at 2,447,625 to 2,447,658
11647020
11789412 - no description, at 2,447,625 to 2,447,658
11789412
11504658 - no description, at 2,447,659 to 2,447,690
11504658
11647021 - no description, at 2,447,659 to 2,447,690
11647021
11789413 - no description, at 2,447,659 to 2,447,690
11789413
11504659 - no description, at 2,447,691 to 2,447,724
11504659
11647022 - no description, at 2,447,691 to 2,447,724
11647022
11789414 - no description, at 2,447,691 to 2,447,724
11789414
11504660 - no description, at 2,447,725 to 2,447,756
11504660
11647023 - no description, at 2,447,725 to 2,447,756
11647023
11789415 - no description, at 2,447,725 to 2,447,756
11789415
11504661 - no description, at 2,447,757 to 2,447,792
11504661
11647024 - no description, at 2,447,757 to 2,447,792
11647024
11789416 - no description, at 2,447,757 to 2,447,792
11789416
11504662 - no description, at 2,447,793 to 2,447,824
11504662
11647025 - no description, at 2,447,793 to 2,447,824
11647025
11789417 - no description, at 2,447,793 to 2,447,824
11789417
11504663 - no description, at 2,447,825 to 2,447,859
11504663
11647026 - no description, at 2,447,825 to 2,447,859
11647026
11789418 - no description, at 2,447,825 to 2,447,859
11789418
11504664 - no description, at 2,447,860 to 2,447,891
11504664
11647027 - no description, at 2,447,860 to 2,447,891
11647027
11789419 - no description, at 2,447,860 to 2,447,891
11789419
11504665 - no description, at 2,447,892 to 2,447,925
11504665
11647028 - no description, at 2,447,892 to 2,447,925
11647028
11789420 - no description, at 2,447,892 to 2,447,925
11789420
11504666 - no description, at 2,447,926 to 2,447,957
11504666
11647029 - no description, at 2,447,926 to 2,447,957
11647029
11789421 - no description, at 2,447,926 to 2,447,957
11789421
11504667 - no description, at 2,447,958 to 2,447,991
11504667
11647030 - no description, at 2,447,958 to 2,447,991
11647030
11789422 - no description, at 2,447,958 to 2,447,991
11789422
11504668 - no description, at 2,447,992 to 2,448,023
11504668
11647031 - no description, at 2,447,992 to 2,448,023
11647031
11789423 - no description, at 2,447,992 to 2,448,023
11789423
11504669 - no description, at 2,448,024 to 2,448,056
11504669
11647032 - no description, at 2,448,024 to 2,448,056
11647032
11789424 - no description, at 2,448,024 to 2,448,056
11789424
11504670 - no description, at 2,448,057 to 2,448,088
11504670
11647033 - no description, at 2,448,057 to 2,448,088
11647033
11789425 - no description, at 2,448,057 to 2,448,088
11789425
11504671 - no description, at 2,448,089 to 2,448,119
11504671
11647034 - no description, at 2,448,089 to 2,448,119
11647034
11789426 - no description, at 2,448,089 to 2,448,119
11789426
11504672 - no description, at 2,448,120 to 2,448,137
11504672
11647035 - no description, at 2,448,120 to 2,448,137
11647035
11789427 - no description, at 2,448,120 to 2,448,137
11789427
DvMF_1978: DvMF_1978 - hypothetical protein (RefSeq), at 2,448,257 to 2,448,454
_1978
DvMF_1979: DvMF_1979 - hypothetical protein (RefSeq), at 2,448,558 to 2,449,097
_1979
DvMF_1980: DvMF_1980 - hypothetical protein (RefSeq), at 2,449,371 to 2,449,688
_1980
Position (kb)
2448
2449 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2447.770 kb on + strand at 2447.799 kb on - strand at 2447.806 kb on - strand at 2448.050 kb on + strand at 2448.050 kb on + strand at 2448.050 kb on + strand at 2448.268 kb on - strand at 2448.352 kb on + strand, within DvMF_1978 at 2448.515 kb on - strand at 2448.605 kb on + strand at 2448.821 kb on + strand, within DvMF_1979 at 2448.837 kb on - strand, within DvMF_1979 at 2449.024 kb on + strand, within DvMF_1979 at 2449.024 kb on + strand, within DvMF_1979 at 2449.034 kb on + strand, within DvMF_1979 at 2449.162 kb on + strand at 2449.202 kb on - strand at 2449.204 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.0625 mg/ml remove 2,447,770 + -0.5 2,447,799 - -0.3 2,447,806 - -0.2 2,448,050 + -0.7 2,448,050 + -1.0 2,448,050 + -0.6 2,448,268 - -1.3 2,448,352 + DvMF_1978 0.48 -2.6 2,448,515 - -1.7 2,448,605 + -0.4 2,448,821 + DvMF_1979 0.49 -0.8 2,448,837 - DvMF_1979 0.52 +0.6 2,449,024 + DvMF_1979 0.86 +0.1 2,449,024 + DvMF_1979 0.86 -1.1 2,449,034 + DvMF_1979 0.88 -1.2 2,449,162 + -0.3 2,449,202 - -3.0 2,449,204 + -0.2
Or see this region's nucleotide sequence