Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1941
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,395,515 | + | DvMF_1940 | 0.39 | -0.3 | |
| 2,395,548 | + | DvMF_1940 | 0.41 | -0.1 | |
| 2,395,568 | - | DvMF_1940 | 0.42 | -0.3 | |
| 2,395,574 | + | DvMF_1940 | 0.43 | -0.2 | |
| 2,395,801 | - | DvMF_1940 | 0.56 | -1.3 | |
| 2,396,046 | - | DvMF_1940 | 0.70 | -0.3 | |
| 2,396,140 | + | DvMF_1940 | 0.75 | -0.8 | |
| 2,396,140 | + | DvMF_1940 | 0.75 | -0.5 | |
| 2,396,143 | - | DvMF_1940 | 0.75 | -0.5 | |
| 2,396,308 | - | DvMF_1940 | 0.85 | -0.8 | |
| 2,396,629 | - | DvMF_1941 | 0.35 | +1.1 | |
| 2,396,730 | - | DvMF_1941 | 0.62 | +0.5 | |
| 2,396,775 | - | DvMF_1941 | 0.74 | +0.7 | |
| 2,396,960 | - | -0.2 | |||
| 2,396,976 | + | +0.7 | |||
| 2,397,367 | + | -3.5 | |||
| 2,397,387 | + | -0.6 | |||
| 2,397,443 | - | DvMF_1942 | 0.12 | -4.1 | |
| 2,397,728 | + | DvMF_1942 | 0.34 | -1.2 | |
| 2,397,736 | - | DvMF_1942 | 0.34 | -2.2 | |
| 2,397,743 | - | DvMF_1942 | 0.35 | -2.5 | |
| 2,397,854 | + | DvMF_1942 | 0.44 | -0.3 |
Or see this region's nucleotide sequence