Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1905
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,345,308 | + | -0.6 | |||
2,345,369 | - | -0.8 | |||
2,345,532 | + | -0.4 | |||
2,345,673 | + | +0.3 | |||
2,345,764 | - | DvMF_1905 | 0.13 | +0.9 | |
2,345,844 | + | DvMF_1905 | 0.18 | +0.7 | |
2,345,862 | - | DvMF_1905 | 0.19 | +1.1 | |
2,346,051 | + | DvMF_1905 | 0.31 | +0.6 | |
2,346,418 | - | DvMF_1905 | 0.53 | +2.3 | |
2,346,499 | + | DvMF_1905 | 0.58 | +0.5 | |
2,346,613 | - | DvMF_1905 | 0.65 | +0.6 | |
2,346,696 | + | DvMF_1905 | 0.70 | +0.4 | |
2,346,696 | + | DvMF_1905 | 0.70 | +0.6 | |
2,346,740 | - | DvMF_1905 | 0.72 | +0.3 | |
2,347,415 | - | -0.7 | |||
2,347,827 | - | DvMF_1906 | 0.31 | -2.1 |
Or see this region's nucleotide sequence