Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1876
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,306,600 | + | -1.4 | |||
| 2,306,805 | - | -1.5 | |||
| 2,307,043 | + | +0.0 | |||
| 2,307,245 | - | -2.4 | |||
| 2,307,250 | - | -0.2 | |||
| 2,307,257 | + | -0.7 | |||
| 2,307,260 | - | -1.1 | |||
| 2,307,262 | + | -1.4 | |||
| 2,307,262 | + | -1.6 | |||
| 2,307,262 | + | +0.2 | |||
| 2,307,265 | - | -0.6 | |||
| 2,307,267 | + | +0.6 | |||
| 2,307,536 | - | DvMF_1876 | 0.13 | +0.5 | |
| 2,308,395 | + | +0.2 | |||
| 2,308,500 | + | DvMF_1877 | 0.32 | -0.1 | |
| 2,308,549 | + | DvMF_1877 | 0.44 | -0.3 | |
| 2,308,595 | + | DvMF_1877 | 0.55 | -1.1 | |
| 2,308,595 | + | DvMF_1877 | 0.55 | +0.0 | |
| 2,308,603 | - | DvMF_1877 | 0.57 | -0.8 | |
| 2,308,603 | - | DvMF_1877 | 0.57 | -0.7 | |
| 2,308,753 | - | -0.4 | |||
| 2,308,778 | - | +0.3 | |||
| 2,308,778 | - | -0.1 |
Or see this region's nucleotide sequence