Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1756 and DvMF_1757 are separated by 252 nucleotides DvMF_1757 and DvMF_1758 are separated by 288 nucleotides DvMF_1758 and DvMF_1759 are separated by 216 nucleotides
DvMF_1756: DvMF_1756 - hypothetical protein (RefSeq), at 2,145,131 to 2,145,946
_1756
DvMF_1757: DvMF_1757 - hypothetical protein (RefSeq), at 2,146,199 to 2,146,348
_1757
DvMF_1758: DvMF_1758 - UvrD/REP helicase (RefSeq), at 2,146,637 to 2,150,371
_1758
DvMF_1759: DvMF_1759 - hypothetical protein (RefSeq), at 2,150,588 to 2,151,784
_1759
Position (kb)
2146
2147
2148
2149
2150
2151 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2145.822 kb on - strand, within DvMF_1756 at 2145.822 kb on - strand, within DvMF_1756 at 2145.897 kb on + strand at 2145.950 kb on - strand at 2146.134 kb on - strand at 2146.155 kb on - strand at 2146.190 kb on - strand at 2146.425 kb on - strand at 2146.541 kb on + strand at 2146.560 kb on - strand at 2146.609 kb on + strand at 2146.949 kb on - strand at 2146.949 kb on - strand at 2147.117 kb on - strand, within DvMF_1758 at 2147.117 kb on - strand, within DvMF_1758 at 2147.358 kb on + strand, within DvMF_1758 at 2147.583 kb on + strand, within DvMF_1758 at 2148.011 kb on + strand, within DvMF_1758 at 2148.125 kb on - strand, within DvMF_1758 at 2148.459 kb on + strand, within DvMF_1758 at 2148.472 kb on + strand, within DvMF_1758 at 2148.668 kb on - strand, within DvMF_1758 at 2148.687 kb on + strand, within DvMF_1758 at 2148.975 kb on + strand, within DvMF_1758 at 2148.989 kb on + strand, within DvMF_1758 at 2149.048 kb on + strand, within DvMF_1758 at 2149.171 kb on - strand, within DvMF_1758 at 2149.196 kb on + strand, within DvMF_1758 at 2149.606 kb on - strand, within DvMF_1758 at 2149.614 kb on - strand, within DvMF_1758 at 2149.860 kb on + strand, within DvMF_1758 at 2149.860 kb on + strand, within DvMF_1758 at 2150.090 kb on + strand at 2150.301 kb on + strand at 2150.363 kb on - strand at 2150.442 kb on + strand at 2150.477 kb on - strand at 2150.735 kb on + strand, within DvMF_1759 at 2150.735 kb on - strand, within DvMF_1759 at 2150.921 kb on + strand, within DvMF_1759 at 2150.955 kb on + strand, within DvMF_1759 at 2151.034 kb on + strand, within DvMF_1759 at 2151.338 kb on - strand, within DvMF_1759 at 2151.340 kb on + strand, within DvMF_1759 at 2151.340 kb on + strand, within DvMF_1759 at 2151.340 kb on + strand, within DvMF_1759
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.0625 mg/ml remove 2,145,822 - DvMF_1756 0.85 +0.1 2,145,822 - DvMF_1756 0.85 +0.5 2,145,897 + -0.8 2,145,950 - -0.4 2,146,134 - -0.1 2,146,155 - -0.9 2,146,190 - -2.2 2,146,425 - -0.6 2,146,541 + -3.1 2,146,560 - +0.3 2,146,609 + -0.2 2,146,949 - -0.4 2,146,949 - -0.4 2,147,117 - DvMF_1758 0.13 +0.3 2,147,117 - DvMF_1758 0.13 -0.6 2,147,358 + DvMF_1758 0.19 -0.4 2,147,583 + DvMF_1758 0.25 -0.3 2,148,011 + DvMF_1758 0.37 -0.5 2,148,125 - DvMF_1758 0.40 -0.8 2,148,459 + DvMF_1758 0.49 -1.9 2,148,472 + DvMF_1758 0.49 +0.4 2,148,668 - DvMF_1758 0.54 +0.3 2,148,687 + DvMF_1758 0.55 -0.5 2,148,975 + DvMF_1758 0.63 -0.5 2,148,989 + DvMF_1758 0.63 -0.3 2,149,048 + DvMF_1758 0.65 -0.4 2,149,171 - DvMF_1758 0.68 -0.6 2,149,196 + DvMF_1758 0.69 +3.0 2,149,606 - DvMF_1758 0.79 +0.6 2,149,614 - DvMF_1758 0.80 +1.0 2,149,860 + DvMF_1758 0.86 -2.6 2,149,860 + DvMF_1758 0.86 -3.0 2,150,090 + -0.2 2,150,301 + -0.5 2,150,363 - -0.1 2,150,442 + -2.3 2,150,477 - +0.2 2,150,735 + DvMF_1759 0.12 -0.7 2,150,735 - DvMF_1759 0.12 -0.9 2,150,921 + DvMF_1759 0.28 -1.0 2,150,955 + DvMF_1759 0.31 -0.7 2,151,034 + DvMF_1759 0.37 -0.4 2,151,338 - DvMF_1759 0.63 -1.2 2,151,340 + DvMF_1759 0.63 -1.0 2,151,340 + DvMF_1759 0.63 -1.2 2,151,340 + DvMF_1759 0.63 -1.2
Or see this region's nucleotide sequence