Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1659 and DvMF_1660 are separated by 72 nucleotides DvMF_1660 and DvMF_1661 are separated by 525 nucleotides DvMF_1661 and DvMF_1662 overlap by 19 nucleotides DvMF_1662 and DvMF_1663 overlap by 29 nucleotides DvMF_1663 and DvMF_1664 are separated by 2 nucleotides
DvMF_1659: DvMF_1659 - putative phage terminase, small subunit, P27 family (RefSeq), at 2,036,658 to 2,037,131
_1659
DvMF_1660: DvMF_1660 - HNH endonuclease (RefSeq), at 2,037,204 to 2,037,599
_1660
DvMF_1661: DvMF_1661 - hypothetical protein (RefSeq), at 2,038,125 to 2,038,472
_1661
DvMF_1662: DvMF_1662 - hypothetical protein (RefSeq), at 2,038,454 to 2,038,684
_1662
DvMF_1663: DvMF_1663 - hypothetical protein (RefSeq), at 2,038,656 to 2,039,039
_1663
DvMF_1664: DvMF_1664 - hypothetical protein (RefSeq), at 2,039,042 to 2,039,449
_1664
Position (kb)
2038
2039 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2037.201 kb on + strand at 2037.254 kb on - strand, within DvMF_1660 at 2037.285 kb on - strand, within DvMF_1660 at 2037.526 kb on - strand, within DvMF_1660 at 2037.600 kb on - strand at 2037.772 kb on + strand at 2037.775 kb on - strand at 2037.780 kb on - strand at 2037.780 kb on - strand at 2037.825 kb on - strand at 2037.879 kb on - strand at 2038.111 kb on - strand at 2038.165 kb on + strand, within DvMF_1661 at 2038.394 kb on - strand, within DvMF_1661 at 2038.459 kb on - strand at 2038.505 kb on + strand, within DvMF_1662 at 2038.523 kb on - strand, within DvMF_1662 at 2038.551 kb on - strand, within DvMF_1662 at 2038.615 kb on + strand, within DvMF_1662 at 2038.671 kb on + strand at 2038.701 kb on - strand, within DvMF_1663 at 2038.889 kb on + strand, within DvMF_1663 at 2038.935 kb on - strand, within DvMF_1663 at 2038.947 kb on + strand, within DvMF_1663 at 2039.104 kb on + strand, within DvMF_1664 at 2039.276 kb on - strand, within DvMF_1664 at 2039.276 kb on - strand, within DvMF_1664 at 2039.371 kb on - strand, within DvMF_1664
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.0625 mg/ml remove 2,037,201 + -0.1 2,037,254 - DvMF_1660 0.13 -0.5 2,037,285 - DvMF_1660 0.20 -2.0 2,037,526 - DvMF_1660 0.81 -0.5 2,037,600 - -0.4 2,037,772 + -0.2 2,037,775 - +0.1 2,037,780 - -2.7 2,037,780 - -2.8 2,037,825 - -1.5 2,037,879 - -0.8 2,038,111 - -0.2 2,038,165 + DvMF_1661 0.11 -1.5 2,038,394 - DvMF_1661 0.77 -4.0 2,038,459 - -0.2 2,038,505 + DvMF_1662 0.22 +0.0 2,038,523 - DvMF_1662 0.30 -0.7 2,038,551 - DvMF_1662 0.42 -2.5 2,038,615 + DvMF_1662 0.70 -3.7 2,038,671 + -0.4 2,038,701 - DvMF_1663 0.12 -2.7 2,038,889 + DvMF_1663 0.61 -0.3 2,038,935 - DvMF_1663 0.73 -1.0 2,038,947 + DvMF_1663 0.76 -1.5 2,039,104 + DvMF_1664 0.15 -0.7 2,039,276 - DvMF_1664 0.57 -0.3 2,039,276 - DvMF_1664 0.57 -0.6 2,039,371 - DvMF_1664 0.81 -0.1
Or see this region's nucleotide sequence