Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1482
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,815,001 | - | DvMF_1480 | 0.79 | -0.5 | |
1,815,039 | + | DvMF_1480 | 0.84 | -2.9 | |
1,815,205 | - | -0.4 | |||
1,815,218 | + | +0.4 | |||
1,815,218 | + | +0.8 | |||
1,815,365 | + | DvMF_1481 | 0.25 | -0.8 | |
1,815,492 | - | DvMF_1481 | 0.42 | -2.0 | |
1,815,612 | - | DvMF_1481 | 0.57 | -1.4 | |
1,815,646 | + | DvMF_1481 | 0.61 | -0.5 | |
1,815,690 | + | DvMF_1481 | 0.67 | -0.9 | |
1,815,813 | - | DvMF_1481 | 0.83 | -0.8 | |
1,815,859 | + | DvMF_1481 | 0.89 | -0.6 | |
1,816,159 | + | DvMF_1482 | 0.20 | -0.8 | |
1,816,318 | - | DvMF_1482 | 0.35 | -0.6 | |
1,816,349 | - | DvMF_1482 | 0.37 | -1.3 | |
1,816,422 | + | DvMF_1482 | 0.44 | -0.8 | |
1,816,482 | + | DvMF_1482 | 0.50 | -0.8 | |
1,816,596 | + | DvMF_1482 | 0.60 | -1.0 | |
1,816,704 | - | DvMF_1482 | 0.70 | -1.1 | |
1,816,798 | + | DvMF_1482 | 0.79 | -1.0 | |
1,816,943 | + | -1.3 | |||
1,817,011 | + | -0.0 | |||
1,817,243 | - | DvMF_1483 | 0.25 | -0.6 | |
1,817,465 | + | DvMF_1483 | 0.50 | -1.4 | |
1,817,535 | + | DvMF_1483 | 0.58 | -0.5 | |
1,817,551 | + | DvMF_1483 | 0.59 | -1.3 | |
1,817,662 | - | DvMF_1483 | 0.72 | -1.1 | |
1,817,838 | - | +0.1 | |||
1,817,848 | - | -0.5 | |||
1,817,878 | - | -0.7 | |||
1,817,953 | + | -1.2 |
Or see this region's nucleotide sequence