Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1250
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,544,731 | - | DvMF_1249 | 0.33 | -1.3 | |
1,544,891 | - | DvMF_1249 | 0.47 | -1.0 | |
1,544,911 | - | DvMF_1249 | 0.49 | -3.7 | |
1,545,318 | - | DvMF_1249 | 0.84 | -0.9 | |
1,545,318 | - | DvMF_1249 | 0.84 | -1.0 | |
1,545,493 | + | -0.1 | |||
1,545,712 | - | DvMF_1250 | 0.20 | -0.6 | |
1,545,792 | - | DvMF_1250 | 0.34 | -0.6 | |
1,545,797 | - | DvMF_1250 | 0.35 | -0.7 | |
1,546,030 | + | DvMF_1250 | 0.75 | -0.4 | |
1,546,038 | - | DvMF_1250 | 0.76 | -1.9 | |
1,546,327 | + | -0.7 | |||
1,546,634 | - | -0.6 | |||
1,546,654 | - | -0.6 | |||
1,546,724 | - | -0.5 | |||
1,546,729 | - | -0.6 | |||
1,546,782 | + | -0.9 | |||
1,546,978 | - | DvMF_1251 | 0.16 | +0.8 |
Or see this region's nucleotide sequence