Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0943
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,142,955 | - | DvMF_0942 | 0.14 | +1.1 | |
| 1,143,436 | - | DvMF_0942 | 0.76 | +0.1 | |
| 1,143,506 | + | DvMF_0942 | 0.85 | -0.5 | |
| 1,143,601 | + | -0.5 | |||
| 1,143,757 | - | -1.0 | |||
| 1,143,782 | + | -0.6 | |||
| 1,143,782 | + | -1.2 | |||
| 1,143,790 | - | -1.0 | |||
| 1,143,790 | - | -0.3 | |||
| 1,143,790 | - | -0.8 | |||
| 1,143,790 | - | -1.0 | |||
| 1,143,828 | + | -0.3 | |||
| 1,144,527 | - | +0.5 | |||
| 1,144,662 | - | DvMF_0944 | 0.25 | -0.5 | |
| 1,144,880 | - | DvMF_0944 | 0.50 | -1.2 | |
| 1,144,975 | + | DvMF_0944 | 0.62 | -0.7 | |
| 1,144,983 | - | DvMF_0944 | 0.63 | -1.2 | |
| 1,145,030 | - | DvMF_0944 | 0.68 | +0.3 |
Or see this region's nucleotide sequence