Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0798
Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 961,915 | - | DvMF_0797 | 0.45 | -0.1 | |
| 962,031 | - | DvMF_0797 | 0.63 | -0.4 | |
| 962,064 | - | DvMF_0797 | 0.68 | +0.3 | |
| 962,183 | + | DvMF_0797 | 0.86 | -0.4 | |
| 962,417 | - | +0.0 | |||
| 962,504 | + | -0.7 | |||
| 962,583 | - | -0.6 | |||
| 962,859 | + | DvMF_0798 | 0.42 | -0.9 | |
| 963,068 | + | DvMF_0798 | 0.76 | -1.8 | |
| 963,186 | - | -0.1 | |||
| 963,734 | + | thiH | DvMF_0799 | 0.35 | -1.6 |
| 963,885 | + | thiH | DvMF_0799 | 0.47 | -2.0 |
| 963,893 | - | thiH | DvMF_0799 | 0.47 | -1.0 |
| 963,967 | + | thiH | DvMF_0799 | 0.53 | -1.4 |
| 963,980 | + | thiH | DvMF_0799 | 0.54 | +0.8 |
| 964,032 | - | thiH | DvMF_0799 | 0.59 | -0.3 |
| 964,065 | - | thiH | DvMF_0799 | 0.61 | -1.0 |
Or see this region's nucleotide sequence