Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0654 and DvMF_0655 are separated by 602 nucleotides DvMF_0655 and DvMF_0656 are separated by 97 nucleotides
DvMF_0654: DvMF_0654 - Amidohydrolase 3 (RefSeq), at 787,496 to 789,118
_0654
DvMF_0655: DvMF_0655 - ABC transporter related (RefSeq), at 789,721 to 790,773
_0655
DvMF_0656: DvMF_0656 - extracellular solute-binding protein family 1 (RefSeq), at 790,871 to 792,166
_0656
Position (kb) 789
790
791 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 788.768 kb on + strand, within DvMF_0654 at 788.790 kb on + strand, within DvMF_0654 at 788.883 kb on - strand, within DvMF_0654 at 789.113 kb on + strand at 789.264 kb on + strand at 789.418 kb on - strand at 789.429 kb on - strand at 789.476 kb on - strand at 789.625 kb on + strand at 789.674 kb on - strand at 789.854 kb on - strand, within DvMF_0655 at 789.871 kb on + strand, within DvMF_0655 at 789.925 kb on + strand, within DvMF_0655 at 790.087 kb on - strand, within DvMF_0655 at 790.140 kb on + strand, within DvMF_0655 at 790.147 kb on + strand, within DvMF_0655 at 790.400 kb on + strand, within DvMF_0655 at 790.559 kb on - strand, within DvMF_0655 at 790.578 kb on - strand, within DvMF_0655 at 790.621 kb on - strand, within DvMF_0655 at 790.778 kb on + strand at 790.805 kb on - strand at 791.053 kb on + strand, within DvMF_0656 at 791.094 kb on + strand, within DvMF_0656 at 791.278 kb on - strand, within DvMF_0656 at 791.456 kb on + strand, within DvMF_0656 at 791.510 kb on + strand, within DvMF_0656 at 791.574 kb on - strand, within DvMF_0656 at 791.621 kb on + strand, within DvMF_0656
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.0625 mg/ml remove 788,768 + DvMF_0654 0.78 -0.6 788,790 + DvMF_0654 0.80 -0.1 788,883 - DvMF_0654 0.85 -0.8 789,113 + +0.1 789,264 + -1.6 789,418 - -2.8 789,429 - -1.5 789,476 - -0.7 789,625 + -0.4 789,674 - -1.2 789,854 - DvMF_0655 0.13 -0.8 789,871 + DvMF_0655 0.14 -0.1 789,925 + DvMF_0655 0.19 -0.8 790,087 - DvMF_0655 0.35 +0.7 790,140 + DvMF_0655 0.40 -0.1 790,147 + DvMF_0655 0.40 -0.5 790,400 + DvMF_0655 0.64 -0.7 790,559 - DvMF_0655 0.80 -0.0 790,578 - DvMF_0655 0.81 -0.9 790,621 - DvMF_0655 0.85 -0.5 790,778 + +0.3 790,805 - -0.1 791,053 + DvMF_0656 0.14 -0.1 791,094 + DvMF_0656 0.17 +0.1 791,278 - DvMF_0656 0.31 -0.4 791,456 + DvMF_0656 0.45 -0.3 791,510 + DvMF_0656 0.49 +0.6 791,574 - DvMF_0656 0.54 -0.5 791,621 + DvMF_0656 0.58 -0.4
Or see this region's nucleotide sequence