Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0589 and DvMF_0590 are separated by 393 nucleotides DvMF_0590 and DvMF_0591 are separated by 313 nucleotides DvMF_0591 and DvMF_0592 are separated by 239 nucleotides
DvMF_0589: DvMF_0589 - glycosyl transferase, group 2 family protein (RefSeq), at 698,216 to 699,343
_0589
DvMF_0590: DvMF_0590 - ATP-dependent protease, putative (RefSeq), at 699,737 to 702,172
_0590
DvMF_0591: DvMF_0591 - hypothetical protein (RefSeq), at 702,486 to 702,674
_0591
DvMF_0592: DvMF_0592 - major facilitator superfamily MFS_1 (RefSeq), at 702,914 to 704,065
_0592
Position (kb) 699
700
701
702
703 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 698.932 kb on - strand, within DvMF_0589 at 699.128 kb on + strand, within DvMF_0589 at 699.296 kb on + strand at 699.398 kb on - strand at 699.673 kb on + strand at 699.787 kb on - strand at 699.962 kb on - strand at 699.962 kb on - strand at 699.962 kb on - strand at 700.062 kb on - strand, within DvMF_0590 at 700.122 kb on - strand, within DvMF_0590 at 700.216 kb on + strand, within DvMF_0590 at 700.438 kb on - strand, within DvMF_0590 at 700.475 kb on - strand, within DvMF_0590 at 700.830 kb on - strand, within DvMF_0590 at 700.830 kb on - strand, within DvMF_0590 at 700.896 kb on - strand, within DvMF_0590 at 700.918 kb on - strand, within DvMF_0590 at 701.060 kb on + strand, within DvMF_0590 at 701.082 kb on + strand, within DvMF_0590 at 701.157 kb on - strand, within DvMF_0590 at 701.315 kb on + strand, within DvMF_0590 at 701.332 kb on + strand, within DvMF_0590 at 701.415 kb on + strand, within DvMF_0590 at 702.074 kb on + strand at 702.216 kb on - strand at 702.738 kb on - strand at 702.963 kb on + strand at 702.965 kb on + strand at 703.034 kb on + strand, within DvMF_0592 at 703.050 kb on + strand, within DvMF_0592 at 703.073 kb on - strand, within DvMF_0592 at 703.083 kb on - strand, within DvMF_0592
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.0625 mg/ml remove 698,932 - DvMF_0589 0.63 -0.6 699,128 + DvMF_0589 0.81 +0.4 699,296 + -0.4 699,398 - -1.3 699,673 + -0.8 699,787 - -2.5 699,962 - -1.5 699,962 - -1.4 699,962 - -0.8 700,062 - DvMF_0590 0.13 -0.1 700,122 - DvMF_0590 0.16 -1.3 700,216 + DvMF_0590 0.20 -0.9 700,438 - DvMF_0590 0.29 -4.9 700,475 - DvMF_0590 0.30 -1.1 700,830 - DvMF_0590 0.45 -1.3 700,830 - DvMF_0590 0.45 -1.9 700,896 - DvMF_0590 0.48 -0.9 700,918 - DvMF_0590 0.48 +0.7 701,060 + DvMF_0590 0.54 -0.5 701,082 + DvMF_0590 0.55 +0.1 701,157 - DvMF_0590 0.58 -1.3 701,315 + DvMF_0590 0.65 -1.5 701,332 + DvMF_0590 0.65 -0.6 701,415 + DvMF_0590 0.69 -0.6 702,074 + -0.2 702,216 - -0.1 702,738 - +0.4 702,963 + -2.0 702,965 + -0.4 703,034 + DvMF_0592 0.10 -0.4 703,050 + DvMF_0592 0.12 -0.8 703,073 - DvMF_0592 0.14 -1.2 703,083 - DvMF_0592 0.15 -1.1
Or see this region's nucleotide sequence