Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0511 and DvMF_0512 are separated by 358 nucleotides DvMF_0512 and DvMF_0513 are separated by 136 nucleotides
DvMF_0511: DvMF_0511 - transcriptional regulator, LysR family (RefSeq), at 601,559 to 603,658
_0511
DvMF_0512: DvMF_0512 - conserved integral membrane protein (RefSeq), at 604,017 to 604,727
_0512
DvMF_0513: DvMF_0513 - transcriptional regulator, GntR family (RefSeq), at 604,864 to 605,730
_0513
Position (kb) 604
605 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 603.207 kb on - strand, within DvMF_0511 at 603.207 kb on - strand, within DvMF_0511 at 603.238 kb on + strand, within DvMF_0511 at 603.257 kb on + strand, within DvMF_0511 at 603.265 kb on - strand, within DvMF_0511 at 603.330 kb on + strand, within DvMF_0511 at 603.330 kb on + strand, within DvMF_0511 at 603.337 kb on - strand, within DvMF_0511 at 603.388 kb on - strand, within DvMF_0511 at 603.422 kb on - strand, within DvMF_0511 at 603.438 kb on + strand, within DvMF_0511 at 604.071 kb on - strand at 604.123 kb on + strand, within DvMF_0512 at 604.333 kb on - strand, within DvMF_0512 at 604.356 kb on - strand, within DvMF_0512 at 604.467 kb on - strand, within DvMF_0512 at 604.486 kb on + strand, within DvMF_0512 at 604.513 kb on - strand, within DvMF_0512 at 604.567 kb on + strand, within DvMF_0512 at 604.614 kb on - strand, within DvMF_0512 at 604.868 kb on + strand at 604.876 kb on - strand at 604.923 kb on + strand at 604.994 kb on + strand, within DvMF_0513 at 605.069 kb on - strand, within DvMF_0513 at 605.076 kb on - strand, within DvMF_0513 at 605.216 kb on - strand, within DvMF_0513 at 605.232 kb on + strand, within DvMF_0513 at 605.252 kb on - strand, within DvMF_0513 at 605.272 kb on + strand, within DvMF_0513 at 605.305 kb on + strand, within DvMF_0513 at 605.429 kb on + strand, within DvMF_0513 at 605.450 kb on - strand, within DvMF_0513 at 605.593 kb on + strand, within DvMF_0513
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.0625 mg/ml remove 603,207 - DvMF_0511 0.78 +0.0 603,207 - DvMF_0511 0.78 -1.0 603,238 + DvMF_0511 0.80 -0.1 603,257 + DvMF_0511 0.81 -0.3 603,265 - DvMF_0511 0.81 -4.1 603,330 + DvMF_0511 0.84 -0.7 603,330 + DvMF_0511 0.84 -1.2 603,337 - DvMF_0511 0.85 -1.2 603,388 - DvMF_0511 0.87 +0.6 603,422 - DvMF_0511 0.89 -1.7 603,438 + DvMF_0511 0.89 -1.2 604,071 - -1.1 604,123 + DvMF_0512 0.15 -2.8 604,333 - DvMF_0512 0.44 -1.3 604,356 - DvMF_0512 0.48 -1.2 604,467 - DvMF_0512 0.63 -0.7 604,486 + DvMF_0512 0.66 -0.3 604,513 - DvMF_0512 0.70 +0.1 604,567 + DvMF_0512 0.77 -1.5 604,614 - DvMF_0512 0.84 -0.5 604,868 + -0.9 604,876 - -2.7 604,923 + -1.2 604,994 + DvMF_0513 0.15 -1.0 605,069 - DvMF_0513 0.24 +0.5 605,076 - DvMF_0513 0.24 -0.3 605,216 - DvMF_0513 0.41 -0.2 605,232 + DvMF_0513 0.42 -1.4 605,252 - DvMF_0513 0.45 -0.5 605,272 + DvMF_0513 0.47 -1.0 605,305 + DvMF_0513 0.51 -3.9 605,429 + DvMF_0513 0.65 -0.4 605,450 - DvMF_0513 0.68 -0.0 605,593 + DvMF_0513 0.84 -2.0
Or see this region's nucleotide sequence