Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0463 and DvMF_0464 are separated by 134 nucleotides DvMF_0464 and DvMF_0465 are separated by 120 nucleotides DvMF_0465 and DvMF_0466 overlap by 4 nucleotides DvMF_0466 and DvMF_0467 overlap by 4 nucleotides
DvMF_0463: DvMF_0463 - GCN5-related N-acetyltransferase (RefSeq), at 541,806 to 542,342
_0463
DvMF_0464: DvMF_0464 - nitrite and sulphite reductase 4Fe-4S region (RefSeq), at 542,477 to 543,154
_0464
DvMF_0465: DvMF_0465 - response regulator receiver modulated CheB methylesterase (RefSeq), at 543,275 to 544,345
_0465
DvMF_0466: DvMF_0466 - MCP methyltransferase, CheR-type (RefSeq), at 544,342 to 545,229
_0466
DvMF_0467: DvMF_0467 - CheA signal transduction histidine kinase (RefSeq), at 545,226 to 547,400
_0467
Position (kb) 543
544
545 Strain fitness (log2 ratio) -1
0
1
2 at 542.555 kb on - strand, within DvMF_0464 at 542.786 kb on + strand, within DvMF_0464 at 542.809 kb on - strand, within DvMF_0464 at 542.896 kb on + strand, within DvMF_0464 at 542.904 kb on - strand, within DvMF_0464 at 542.966 kb on + strand, within DvMF_0464 at 543.220 kb on - strand at 543.266 kb on + strand at 543.274 kb on - strand at 543.362 kb on + strand at 543.383 kb on - strand, within DvMF_0465 at 543.399 kb on - strand, within DvMF_0465 at 543.399 kb on - strand, within DvMF_0465 at 543.781 kb on - strand, within DvMF_0465 at 543.862 kb on - strand, within DvMF_0465 at 544.149 kb on - strand, within DvMF_0465 at 544.341 kb on - strand at 544.601 kb on - strand, within DvMF_0466 at 544.601 kb on - strand, within DvMF_0466 at 544.813 kb on - strand, within DvMF_0466 at 545.039 kb on - strand, within DvMF_0466 at 545.262 kb on - strand at 545.316 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.0625 mg/ml remove 542,555 - DvMF_0464 0.12 -0.9 542,786 + DvMF_0464 0.46 -0.5 542,809 - DvMF_0464 0.49 +0.3 542,896 + DvMF_0464 0.62 -0.9 542,904 - DvMF_0464 0.63 -0.5 542,966 + DvMF_0464 0.72 -0.1 543,220 - -0.1 543,266 + -0.8 543,274 - -1.1 543,362 + +1.6 543,383 - DvMF_0465 0.10 -1.0 543,399 - DvMF_0465 0.12 +2.4 543,399 - DvMF_0465 0.12 +2.0 543,781 - DvMF_0465 0.47 +1.9 543,862 - DvMF_0465 0.55 +1.5 544,149 - DvMF_0465 0.82 +2.4 544,341 - +1.6 544,601 - DvMF_0466 0.29 -0.6 544,601 - DvMF_0466 0.29 -0.6 544,813 - DvMF_0466 0.53 -1.4 545,039 - DvMF_0466 0.78 +0.3 545,262 - -0.3 545,316 + -1.0
Or see this region's nucleotide sequence