Experiment: MoYLS4 with Gentamicin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0203 and DvMF_0204 are separated by 156 nucleotides DvMF_0204 and DvMF_0205 are separated by 39 nucleotides DvMF_0205 and DvMF_0206 are separated by 85 nucleotides
DvMF_0203: DvMF_0203 - Radical SAM domain protein (RefSeq), at 221,147 to 222,682
_0203
DvMF_0204: DvMF_0204 - hypothetical protein (RefSeq), at 222,839 to 223,672
_0204
DvMF_0205: DvMF_0205 - hypothetical protein (RefSeq), at 223,712 to 224,239
_0205
DvMF_0206: DvMF_0206 - hypothetical protein (RefSeq), at 224,325 to 225,326
_0206
Position (kb) 222
223
224 Strain fitness (log2 ratio) -1
0
1 at 222.029 kb on + strand, within DvMF_0203 at 222.148 kb on + strand, within DvMF_0203 at 222.264 kb on - strand, within DvMF_0203 at 222.279 kb on + strand, within DvMF_0203 at 222.287 kb on - strand, within DvMF_0203 at 222.332 kb on - strand, within DvMF_0203 at 222.384 kb on - strand, within DvMF_0203 at 222.504 kb on - strand, within DvMF_0203 at 222.860 kb on + strand at 222.877 kb on + strand at 222.932 kb on - strand, within DvMF_0204 at 222.970 kb on + strand, within DvMF_0204 at 222.970 kb on + strand, within DvMF_0204 at 222.995 kb on - strand, within DvMF_0204 at 223.298 kb on - strand, within DvMF_0204 at 223.346 kb on + strand, within DvMF_0204 at 223.371 kb on + strand, within DvMF_0204 at 223.448 kb on + strand, within DvMF_0204 at 223.556 kb on + strand, within DvMF_0204 at 223.767 kb on - strand, within DvMF_0205 at 224.064 kb on - strand, within DvMF_0205
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.0625 mg/ml remove 222,029 + DvMF_0203 0.57 +0.7 222,148 + DvMF_0203 0.65 +1.3 222,264 - DvMF_0203 0.73 +1.3 222,279 + DvMF_0203 0.74 -0.2 222,287 - DvMF_0203 0.74 +0.4 222,332 - DvMF_0203 0.77 +0.8 222,384 - DvMF_0203 0.81 -1.1 222,504 - DvMF_0203 0.88 +1.1 222,860 + -0.7 222,877 + -0.4 222,932 - DvMF_0204 0.11 -0.7 222,970 + DvMF_0204 0.16 +0.1 222,970 + DvMF_0204 0.16 -0.2 222,995 - DvMF_0204 0.19 -0.3 223,298 - DvMF_0204 0.55 -0.1 223,346 + DvMF_0204 0.61 -0.2 223,371 + DvMF_0204 0.64 -0.2 223,448 + DvMF_0204 0.73 -0.3 223,556 + DvMF_0204 0.86 +0.1 223,767 - DvMF_0205 0.10 +0.0 224,064 - DvMF_0205 0.67 -0.9
Or see this region's nucleotide sequence