Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_1488 and Shew_1489 are separated by 118 nucleotides Shew_1489 and Shew_1490 are separated by 74 nucleotides Shew_1490 and Shew_1491 are separated by 100 nucleotides Shew_1491 and Shew_1492 are separated by 58 nucleotides
Shew_1488: Shew_1488 - FAD linked oxidase domain-containing protein (RefSeq), at 1,711,941 to 1,713,326
_1488
Shew_1489: Shew_1489 - hypothetical protein (RefSeq), at 1,713,445 to 1,714,035
_1489
Shew_1490: Shew_1490 - ErfK/YbiS/YcfS/YnhG family protein (RefSeq), at 1,714,110 to 1,714,694
_1490
Shew_1491: Shew_1491 - Ion transport protein (RefSeq), at 1,714,795 to 1,715,622
_1491
Shew_1492: Shew_1492 - MATE efflux family protein (RefSeq), at 1,715,681 to 1,717,168
_1492
Position (kb) 1714
1715 Strain fitness (log2 ratio) -2
-1
0
1 at 1713.505 kb on - strand, within Shew_1489 at 1713.690 kb on + strand, within Shew_1489 at 1713.707 kb on + strand, within Shew_1489 at 1713.733 kb on - strand, within Shew_1489 at 1713.863 kb on - strand, within Shew_1489 at 1713.938 kb on - strand, within Shew_1489 at 1713.974 kb on + strand, within Shew_1489 at 1714.458 kb on - strand, within Shew_1490
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,713,505 - Shew_1489 0.10 -0.4 1,713,690 + Shew_1489 0.41 -0.3 1,713,707 + Shew_1489 0.44 -0.9 1,713,733 - Shew_1489 0.49 -0.6 1,713,863 - Shew_1489 0.71 +0.1 1,713,938 - Shew_1489 0.83 +0.3 1,713,974 + Shew_1489 0.90 -0.2 1,714,458 - Shew_1490 0.59 -2.1
Or see this region's nucleotide sequence