Strain Fitness in Shewanella loihica PV-4 around Shew_0753

Experiment: pyruvate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShew_0752 and Shew_0753 are separated by 133 nucleotidesShew_0753 and pgk are separated by 102 nucleotides Shew_0752: Shew_0752 - transketolase (RefSeq), at 852,283 to 854,277 _0752 Shew_0753: Shew_0753 - erythrose 4-phosphate dehydrogenase (RefSeq), at 854,411 to 855,427 _0753 Shew_0754: pgk - phosphoglycerate kinase (RefSeq), at 855,530 to 856,705 pgk Position (kb) 854 855 856Strain fitness (log2 ratio) -1 0 1at 854.278 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate (C)
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854,278 + -0.4

Or see this region's nucleotide sequence