Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0660 and Shew_0661 are separated by 70 nucleotides Shew_0661 and Shew_0662 are separated by 234 nucleotides Shew_0662 and Shew_0663 are separated by 6 nucleotides Shew_0663 and Shew_0664 overlap by 1 nucleotides
Shew_0660: Shew_0660 - hypothetical protein (RefSeq), at 750,748 to 751,584
_0660
Shew_0661: Shew_0661 - hypothetical protein (RefSeq), at 751,655 to 751,969
_0661
Shew_0662: Shew_0662 - NAD(P) transhydrogenase, beta subunit (RefSeq), at 752,204 to 753,586
_0662
Shew_0663: Shew_0663 - oxidoreductase (RefSeq), at 753,593 to 753,868
_0663
Shew_0664: Shew_0664 - NAD(P) transhydrogenase subunit alpha (RefSeq), at 753,868 to 755,037
_0664
Position (kb) 752
753
754 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 751.238 kb on + strand, within Shew_0660 at 751.246 kb on - strand, within Shew_0660 at 751.246 kb on - strand, within Shew_0660 at 751.246 kb on - strand, within Shew_0660 at 751.370 kb on + strand, within Shew_0660 at 751.524 kb on + strand at 751.864 kb on - strand, within Shew_0661 at 752.282 kb on - strand at 752.481 kb on + strand, within Shew_0662 at 752.585 kb on - strand, within Shew_0662 at 752.882 kb on + strand, within Shew_0662 at 753.631 kb on + strand, within Shew_0663 at 753.737 kb on - strand, within Shew_0663 at 753.853 kb on - strand at 754.355 kb on + strand, within Shew_0664 at 754.430 kb on - strand, within Shew_0664 at 754.471 kb on - strand, within Shew_0664 at 754.499 kb on - strand, within Shew_0664
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 751,238 + Shew_0660 0.59 -0.3 751,246 - Shew_0660 0.59 -0.5 751,246 - Shew_0660 0.59 +0.0 751,246 - Shew_0660 0.59 -0.2 751,370 + Shew_0660 0.74 +0.3 751,524 + -0.1 751,864 - Shew_0661 0.66 -0.3 752,282 - -3.0 752,481 + Shew_0662 0.20 -0.2 752,585 - Shew_0662 0.28 +0.2 752,882 + Shew_0662 0.49 -2.5 753,631 + Shew_0663 0.14 -2.0 753,737 - Shew_0663 0.52 -3.4 753,853 - -2.3 754,355 + Shew_0664 0.42 -2.3 754,430 - Shew_0664 0.48 -0.8 754,471 - Shew_0664 0.52 -4.0 754,499 - Shew_0664 0.54 -0.4
Or see this region's nucleotide sequence