Strain Fitness in Ralstonia solanacearum IBSBF1503 around RALBFv3_RS07265

Experiment: Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRALBFv3_RS07260 and RALBFv3_RS07265 are separated by 114 nucleotidesRALBFv3_RS07265 and RALBFv3_RS07270 are separated by 446 nucleotidesRALBFv3_RS07270 and RALBFv3_RS07275 are separated by 66 nucleotides RALBFv3_RS07260: RALBFv3_RS07260 - DNA-directed RNA polymerase subunit beta', at 1,597,980 to 1,602,209 _RS07260 RALBFv3_RS07265: RALBFv3_RS07265 - DNA-directed RNA polymerase subunit beta, at 1,602,324 to 1,606,430 _RS07265 RALBFv3_RS07270: RALBFv3_RS07270 - 50S ribosomal protein L7/L12, at 1,606,877 to 1,607,251 _RS07270 RALBFv3_RS07275: RALBFv3_RS07275 - 50S ribosomal protein L10, at 1,607,318 to 1,607,824 _RS07275 Position (kb) 1602 1603 1604 1605 1606 1607Strain fitness (log2 ratio) -1 0 1at 1602.254 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
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1,602,254 - +0.5

Or see this region's nucleotide sequence