Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03321

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
3,501,133	+		CCNA_03320	0.71	+1.4
3,501,134	+		CCNA_03320	0.71	+0.5
3,501,152	-		CCNA_03320	0.71	-3.2
3,501,154	+		CCNA_03320	0.71	-1.9
3,501,162	-		CCNA_03320	0.72	-1.2
3,501,183	+		CCNA_03320	0.72	+0.3
3,501,191	-		CCNA_03320	0.73	+2.8
3,501,192	+		CCNA_03320	0.73	-0.9
3,501,201	-		CCNA_03320	0.73	-2.6
3,501,271	+		CCNA_03320	0.75	-0.7
3,501,286	+		CCNA_03320	0.76	+0.3
3,501,321	+		CCNA_03320	0.77	-1.2
3,501,378	-		CCNA_03320	0.78	-1.0
3,501,380	-		CCNA_03320	0.78	-1.3
3,501,380	-		CCNA_03320	0.78	-0.3
3,501,380	-		CCNA_03320	0.78	-0.7
3,501,380	-		CCNA_03320	0.78	+0.9
3,501,380	-		CCNA_03320	0.78	+2.3
3,501,380	-		CCNA_03320	0.78	-2.0
3,501,380	-		CCNA_03320	0.78	-1.7
3,501,380	-		CCNA_03320	0.78	-1.9
3,501,420	+		CCNA_03320	0.80	-1.3
3,501,468	+		CCNA_03320	0.81	-0.5
3,501,471	+		CCNA_03320	0.81	-1.2
3,501,499	-		CCNA_03320	0.82	-1.2
3,501,499	-		CCNA_03320	0.82	-1.0
3,501,535	-		CCNA_03320	0.83	-1.6
3,501,564	+		CCNA_03320	0.84	+0.5
3,501,566	+		CCNA_03320	0.84	-0.3
3,501,590	+		CCNA_03320	0.85	-3.0
3,501,596	+		CCNA_03320	0.85	+0.2
3,501,596	+		CCNA_03320	0.85	-0.3
3,501,604	-		CCNA_03320	0.85	-0.7
3,501,604	-		CCNA_03320	0.85	-1.3
3,501,604	-		CCNA_03320	0.85	-1.5
3,501,687	-		CCNA_03320	0.88	-1.0
3,501,687	-		CCNA_03320	0.88	-0.4
3,501,690	+		CCNA_03320	0.88	-0.3
3,501,697	+		CCNA_03320	0.88	+1.0
3,501,705	-		CCNA_03320	0.88	+1.8
3,501,720	-		CCNA_03320	0.89	-0.4
3,501,728	+		CCNA_03320	0.89	+0.5
3,501,735	+		CCNA_03320	0.89	-0.9
3,501,735	+		CCNA_03320	0.89	+0.1
3,501,735	+		CCNA_03320	0.89	-1.2
3,501,748	-		CCNA_03320	0.90	+0.2
3,501,749	+		CCNA_03320	0.90	+0.8
3,501,756	-				+2.8
3,501,837	-				+1.8
3,501,846	+				-1.3
3,501,863	+				-0.3
3,501,884	-				+1.8
3,501,903	-				+2.0
3,501,914	-				+0.3
3,501,925	+				+1.6
3,501,925	+				+1.1
3,501,925	+				+0.3
3,501,933	-				+3.0
3,501,933	-				+0.3
3,501,933	-				-0.2
3,501,933	-				-0.4
3,501,933	-				+0.6
3,501,933	-				+0.3
3,501,933	-				+1.2
3,501,933	-				-0.8
3,501,988	-				+1.5
3,501,988	-				+1.0
3,502,003	+				+1.4
3,502,045	-				-0.7
3,502,048	+				+0.7
3,502,056	-				+1.0
3,502,072	+				+1.2
3,502,085	-				+2.1
3,502,100	-				+1.4
3,502,125	+				+3.2
3,502,160	-		CCNA_03321	0.12	+1.5
3,502,174	-		CCNA_03321	0.16	+2.4
3,502,174	-		CCNA_03321	0.16	+3.2
3,502,183	+		CCNA_03321	0.19	+1.3
3,502,199	-		CCNA_03321	0.23	+3.4
3,502,200	+		CCNA_03321	0.23	+1.4
3,502,228	+		CCNA_03321	0.31	+3.6
3,502,261	+		CCNA_03321	0.40	+0.9
3,502,261	+		CCNA_03321	0.40	+1.8
3,502,269	-		CCNA_03321	0.42	+2.8
3,502,302	-		CCNA_03321	0.51	+1.9
3,502,321	+		CCNA_03321	0.56	+2.6
3,502,366	+		CCNA_03321	0.68	+1.4
3,502,374	-		CCNA_03321	0.70	+2.3
3,502,374	-		CCNA_03321	0.70	+2.5
3,502,374	-		CCNA_03321	0.70	+2.9
3,502,409	+		CCNA_03321	0.80	+2.6
3,502,417	-		CCNA_03321	0.82	+2.4
3,502,425	-		CCNA_03321	0.84	+3.0
3,502,443	-		CCNA_03321	0.89	+2.1
3,502,507	-				+2.1
3,502,521	-				+1.5
3,502,522	-				-1.4
3,502,523	+				+3.6
3,502,534	-				+4.6
3,502,568	+				-0.9
3,502,568	-				+0.3
3,502,570	-				+0.3
3,502,651	+				-1.9
3,502,651	+				-2.3
3,502,651	+				-1.5
3,502,651	+				-1.2
3,502,659	-				-4.4
3,502,659	-				+1.8
3,502,675	+				-2.3
3,502,688	+				-2.3
3,502,714	-				-2.3
3,502,719	-				-1.0
3,502,765	-				-0.5
3,502,773	+				-2.5
3,502,812	+		CCNA_03322	0.12	-2.0
3,502,830	-		CCNA_03322	0.13	+2.0
3,502,855	+		CCNA_03322	0.14	-1.9
3,502,855	-		CCNA_03322	0.14	+0.2
3,502,863	-		CCNA_03322	0.15	+1.6
3,502,869	+		CCNA_03322	0.15	-0.5
3,502,882	+		CCNA_03322	0.16	-0.5
3,502,882	+		CCNA_03322	0.16	-1.0
3,502,890	-		CCNA_03322	0.17	+0.6
3,502,946	+		CCNA_03322	0.20	-2.5
3,502,957	-		CCNA_03322	0.21	-2.5
3,502,977	+		CCNA_03322	0.22	-1.6
3,502,985	-		CCNA_03322	0.23	-3.4
3,502,985	-		CCNA_03322	0.23	-3.5
3,502,985	-		CCNA_03322	0.23	-4.2
3,503,040	+		CCNA_03322	0.26	-0.6
3,503,053	-		CCNA_03322	0.27	-3.5
3,503,064	-				+1.8
3,503,127	-		CCNA_03322	0.31	-3.7
3,503,170	-		CCNA_03322	0.34	+2.2
3,503,254	-				+1.8
3,503,263	+		CCNA_03322	0.40	-1.3
3,503,264	-		CCNA_03322	0.40	-2.2
3,503,268	+		CCNA_03322	0.40	-1.6
3,503,268	+		CCNA_03322	0.40	-1.0
3,503,275	+		CCNA_03322	0.41	-1.2
3,503,276	-		CCNA_03322	0.41	-4.5
3,503,292	+		CCNA_03322	0.42	+0.5
3,503,300	-		CCNA_03322	0.42	-3.0
3,503,300	-		CCNA_03322	0.42	-2.5
3,503,305	+		CCNA_03322	0.43	-2.7
3,503,313	-		CCNA_03322	0.43	-3.7
3,503,340	+		CCNA_03322	0.45	-2.3
3,503,340	+		CCNA_03322	0.45	-0.2
3,503,348	-		CCNA_03322	0.45	-3.1
3,503,348	-		CCNA_03322	0.45	-0.5
3,503,369	+		CCNA_03322	0.47	-1.7
3,503,370	-		CCNA_03322	0.47	-3.8
3,503,386	+		CCNA_03322	0.48	-1.2
3,503,388	-		CCNA_03322	0.48	-2.4
3,503,398	-		CCNA_03322	0.49	-0.3
3,503,416	-		CCNA_03322	0.50	-0.5
3,503,423	+		CCNA_03322	0.50	-2.9
3,503,431	-		CCNA_03322	0.51	-2.9
3,503,438	+		CCNA_03322	0.51	-2.2
3,503,472	-		CCNA_03322	0.53	-3.6
3,503,481	+		CCNA_03322	0.54	-1.9