Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03242

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
3,406,268	+		CCNA_03241	0.38	-2.7
3,406,323	-		CCNA_03241	0.42	-1.2
3,406,328	-		CCNA_03241	0.42	-2.4
3,406,337	+		CCNA_03241	0.43	-0.1
3,406,340	-		CCNA_03241	0.43	-1.8
3,406,381	-		CCNA_03241	0.46	-0.9
3,406,381	-		CCNA_03241	0.46	-4.9
3,406,436	-		CCNA_03241	0.50	+0.9
3,406,517	+		CCNA_03241	0.56	-2.0
3,406,526	-				+0.3
3,406,601	+		CCNA_03241	0.62	-1.6
3,406,643	-		CCNA_03241	0.65	-1.7
3,406,643	-		CCNA_03241	0.65	-0.7
3,406,656	+		CCNA_03241	0.66	-3.3
3,406,664	-		CCNA_03241	0.66	-1.0
3,406,669	+		CCNA_03241	0.66	-0.9
3,406,712	+		CCNA_03241	0.70	-3.7
3,406,721	-		CCNA_03241	0.70	-2.5
3,406,726	+		CCNA_03241	0.71	-2.5
3,406,756	+		CCNA_03241	0.73	-2.7
3,406,756	-		CCNA_03241	0.73	-2.1
3,406,775	-		CCNA_03241	0.74	-1.9
3,406,783	+		CCNA_03241	0.75	-1.6
3,406,794	+		CCNA_03241	0.75	-3.0
3,406,836	-		CCNA_03241	0.78	-3.7
3,406,875	-		CCNA_03241	0.81	-2.2
3,406,901	-		CCNA_03241	0.83	-0.7
3,406,903	-		CCNA_03241	0.83	-3.1
3,406,908	+		CCNA_03241	0.84	-1.1
3,406,936	-		CCNA_03241	0.86	-3.4
3,406,954	-		CCNA_03241	0.87	-2.6
3,406,954	-		CCNA_03241	0.87	+2.9
3,406,983	+		CCNA_03241	0.89	-1.7
3,406,993	+		CCNA_03241	0.90	-1.1
3,407,001	-				-0.9
3,407,026	+				-0.9
3,407,034	-				-0.6
3,407,068	+				-1.1
3,407,088	+				-0.7
3,407,097	+				-3.9
3,407,097	+				-2.6
3,407,152	+				-2.1
3,407,167	+				-1.1
3,407,167	+				-1.3
3,407,167	+				-3.1
3,407,167	+				-0.7
3,407,170	-				-0.9
3,407,172	+				-2.9
3,407,175	-				-1.9
3,407,177	+				-1.2
3,407,177	+				-2.0
3,407,177	+				-1.6
3,407,185	-				-4.2
3,407,185	-				-1.1
3,407,185	-				-2.9
3,407,185	-				-1.7
3,407,185	-				-2.6
3,407,207	+				-1.2
3,407,218	+				-0.7
3,407,241	+				-3.5
3,407,247	-				-0.9
3,407,247	-				-1.7
3,407,247	-				-4.4
3,407,253	+				-1.8
3,407,255	+				-0.7
3,407,261	-				-0.9
3,407,263	+				-1.4
3,407,267	+				+0.3
3,407,339	-				-3.5
3,407,346	+				-1.8
3,407,349	-				-0.1
3,407,353	+				-2.2
3,407,361	-				-0.1
3,407,361	-				-4.5
3,407,361	-				-1.1
3,407,389	+				-1.4
3,407,389	+				-2.2
3,407,392	-				-0.7
3,407,404	+				-3.0
3,407,420	+		CCNA_03242	0.11	-0.4
3,407,428	-		CCNA_03242	0.11	-2.7
3,407,506	-		CCNA_03242	0.16	-2.9
3,407,506	-		CCNA_03242	0.16	+0.3
3,407,511	-		CCNA_03242	0.17	-0.9
3,407,536	-		CCNA_03242	0.19	-3.2
3,407,592	+		CCNA_03242	0.22	+1.9
3,407,597	+		CCNA_03242	0.23	-1.3
3,407,605	-		CCNA_03242	0.23	-1.9
3,407,605	-				+0.3
3,407,610	-		CCNA_03242	0.24	-3.1
3,407,639	+		CCNA_03242	0.26	+0.3
3,407,664	+		CCNA_03242	0.27	-0.9
3,407,664	-		CCNA_03242	0.27	-2.8
3,407,669	+		CCNA_03242	0.28	-0.9
3,407,682	-		CCNA_03242	0.29	-2.6
3,407,692	+		CCNA_03242	0.29	-0.7
3,407,695	-		CCNA_03242	0.29	-1.7
3,407,700	-		CCNA_03242	0.30	-2.3
3,407,707	-		CCNA_03242	0.30	-1.3
3,407,740	+		CCNA_03242	0.33	-1.5
3,407,748	-		CCNA_03242	0.33	-3.2
3,407,758	-		CCNA_03242	0.34	-0.4
3,407,773	+		CCNA_03242	0.35	-3.2
3,407,820	-		CCNA_03242	0.38	-2.9
3,407,830	-		CCNA_03242	0.39	+0.9
3,407,835	-		CCNA_03242	0.39	-2.4
3,407,863	-		CCNA_03242	0.41	-1.4
3,407,863	-		CCNA_03242	0.41	-1.6
3,407,868	-		CCNA_03242	0.41	-1.9
3,407,924	-		CCNA_03242	0.45	-2.8
3,407,966	-		CCNA_03242	0.48	-2.5
3,407,977	-		CCNA_03242	0.49	-3.1
3,407,982	+		CCNA_03242	0.49	+0.3
3,407,990	-		CCNA_03242	0.50	-2.0
3,408,026	-		CCNA_03242	0.52	-2.0
3,408,026	-		CCNA_03242	0.52	-4.2
3,408,029	+		CCNA_03242	0.52	-0.4
3,408,069	-		CCNA_03242	0.55	-2.3
3,408,069	-		CCNA_03242	0.55	-3.2
3,408,087	+		CCNA_03242	0.56	-3.4
3,408,149	+		CCNA_03242	0.61	-0.9
3,408,185	+		CCNA_03242	0.63	-3.1
3,408,185	+		CCNA_03242	0.63	-2.8
3,408,185	+		CCNA_03242	0.63	-2.2
3,408,190	+		CCNA_03242	0.63	-2.1
3,408,195	+		CCNA_03242	0.64	-2.4
3,408,198	-		CCNA_03242	0.64	-1.4
3,408,203	-		CCNA_03242	0.64	-0.7
3,408,219	-		CCNA_03242	0.65	-2.6
3,408,222	+		CCNA_03242	0.66	-1.4
3,408,228	+		CCNA_03242	0.66	-1.4
3,408,280	+		CCNA_03242	0.70	-2.0
3,408,299	+		CCNA_03242	0.71	-0.8
3,408,343	+		CCNA_03242	0.74	-1.2
3,408,353	+		CCNA_03242	0.75	+0.1
3,408,363	+		CCNA_03242	0.75	-1.3
3,408,430	+		CCNA_03242	0.80	-2.5
3,408,433	-		CCNA_03242	0.80	-2.6
3,408,433	-		CCNA_03242	0.80	-1.4
3,408,435	+		CCNA_03242	0.80	+0.7
3,408,443	-		CCNA_03242	0.81	-2.8
3,408,446	-		CCNA_03242	0.81	-3.0
3,408,451	-		CCNA_03242	0.81	-2.3
3,408,453	-		CCNA_03242	0.81	-1.0
3,408,478	+		CCNA_03242	0.83	-1.5
3,408,478	+		CCNA_03242	0.83	-3.4
3,408,486	-		CCNA_03242	0.84	-2.0
3,408,486	-		CCNA_03242	0.84	-3.1
3,408,501	+		CCNA_03242	0.85	-0.9
3,408,516	+		CCNA_03242	0.86	-3.0
3,408,524	-		CCNA_03242	0.86	+0.3
3,408,533	+		CCNA_03242	0.87	+0.3
3,408,538	+		CCNA_03242	0.87	-1.3
3,408,538	+		CCNA_03242	0.87	-3.5
3,408,538	+		CCNA_03242	0.87	-2.2
3,408,538	+		CCNA_03242	0.87	-2.9
3,408,538	+		CCNA_03242	0.87	-2.1
3,408,546	-		CCNA_03242	0.88	-2.8
3,408,546	-		CCNA_03242	0.88	-1.7
3,408,546	-		CCNA_03242	0.88	-2.8
3,408,637	-				-0.6
3,408,639	+				-0.9
3,408,639	+				-0.1
3,408,647	-				-2.1
3,408,647	-				-2.0
3,408,647	-				-1.4
3,408,647	-				+1.9
3,408,655	+				-0.9
3,408,663	+				-1.7
3,408,669	-				-2.9
3,408,676	+				-0.7
3,408,700	+				-2.3
3,408,700	+				-0.9
3,408,700	+				-1.0
3,408,700	+				-2.5
3,408,700	+				-2.0
3,408,707	-				-2.9
3,408,707	-				+0.1
3,408,708	-				-1.7
3,408,708	-				-3.0
3,408,718	-				-0.3
3,408,723	+				-1.7
3,408,723	+				-0.9
3,408,723	+				-1.8
3,408,731	-				-2.4
3,408,731	-				-1.7
3,408,742	+				-2.7
3,408,744	+				-2.7
3,408,762	-				-1.7
3,408,762	-				-2.5
3,408,762	-				-2.4
3,408,770	+				-2.2
3,408,770	+				-3.9
3,408,776	-				-2.6
3,408,797	-				-2.5
3,408,811	+				+0.1
3,408,811	+				-1.3
3,408,811	+				-1.4
3,408,829	-				-3.8
3,408,861	-				-3.3
3,408,861	-				-1.1
3,408,888	+		CCNA_03243	0.11	-2.3
3,408,888	+		CCNA_03243	0.11	-2.2
3,408,896	-		CCNA_03243	0.12	-1.1
3,408,896	-		CCNA_03243	0.12	-0.7
3,408,896	-		CCNA_03243	0.12	-2.1
3,408,896	-		CCNA_03243	0.12	-3.3
3,408,910	+		CCNA_03243	0.13	+0.3
3,408,915	+		CCNA_03243	0.13	-3.3
3,408,923	-		CCNA_03243	0.14	+0.1
3,408,933	+		CCNA_03243	0.14	-0.4
3,408,933	+		CCNA_03243	0.14	-1.9
3,408,933	+		CCNA_03243	0.14	-0.9
3,408,941	-		CCNA_03243	0.15	+0.6
3,408,941	-		CCNA_03243	0.15	+0.9
3,408,941	-		CCNA_03243	0.15	-1.1
3,408,942	-		CCNA_03243	0.15	-1.8
3,408,946	+		CCNA_03243	0.15	-1.1
3,408,992	-		CCNA_03243	0.18	-1.8
3,408,998	+		CCNA_03243	0.19	-3.9
3,409,005	+		CCNA_03243	0.19	-1.3
3,409,005	+		CCNA_03243	0.19	-2.0
3,409,021	-		CCNA_03243	0.20	-2.2
3,409,029	+		CCNA_03243	0.21	-2.0
3,409,029	+		CCNA_03243	0.21	-1.7
3,409,029	+		CCNA_03243	0.21	-1.4
3,409,037	-		CCNA_03243	0.21	-0.4
3,409,037	-		CCNA_03243	0.21	-0.9
3,409,039	+		CCNA_03243	0.21	-1.3
3,409,047	-		CCNA_03243	0.22	-1.3
3,409,047	-		CCNA_03243	0.22	-2.6
3,409,078	+		CCNA_03243	0.24	-1.9
3,409,097	+		CCNA_03243	0.25	-2.3
3,409,097	+		CCNA_03243	0.25	+1.9
3,409,097	+		CCNA_03243	0.25	-2.8
3,409,097	+		CCNA_03243	0.25	-2.0
3,409,097	+		CCNA_03243	0.25	+0.3
3,409,097	+		CCNA_03243	0.25	-4.2
3,409,105	-		CCNA_03243	0.26	-2.8
3,409,105	-		CCNA_03243	0.26	+0.3
3,409,139	-		CCNA_03243	0.28	-3.1
3,409,167	+		CCNA_03243	0.30	+1.5
3,409,189	+		CCNA_03243	0.31	-1.4
3,409,197	-		CCNA_03243	0.32	-3.4
3,409,197	-		CCNA_03243	0.32	-0.1
3,409,197	-		CCNA_03243	0.32	-3.0
3,409,197	-		CCNA_03243	0.32	-2.3
3,409,226	+		CCNA_03243	0.34	-1.9
3,409,236	-		CCNA_03243	0.34	-2.1
3,409,242	-		CCNA_03243	0.35	-1.7
3,409,308	+		CCNA_03243	0.39	-0.9
3,409,309	+		CCNA_03243	0.39	-1.4
3,409,333	-		CCNA_03243	0.41	-1.3
3,409,350	+		CCNA_03243	0.42	-2.3
3,409,373	-		CCNA_03243	0.44	-0.1
3,409,378	-		CCNA_03243	0.44	-2.6
3,409,378	-		CCNA_03243	0.44	-1.5
3,409,378	-		CCNA_03243	0.44	-2.3
3,409,384	+		CCNA_03243	0.44	-1.4
3,409,423	-		CCNA_03243	0.47	-0.7
3,409,423	-		CCNA_03243	0.47	-2.4
3,409,423	-		CCNA_03243	0.47	+0.3
3,409,424	-		CCNA_03243	0.47	-3.4
3,409,437	-		CCNA_03243	0.48	-1.3
3,409,465	-		CCNA_03243	0.50	-1.0
3,409,483	+		CCNA_03243	0.51	-1.3
3,409,486	-		CCNA_03243	0.51	-2.1
3,409,491	-		CCNA_03243	0.51	-1.9
3,409,521	+		CCNA_03243	0.53	-0.9
3,409,526	+		CCNA_03243	0.54	-1.5
3,409,550	+		CCNA_03243	0.55	-3.2
3,409,619	-		CCNA_03243	0.60	-2.0
3,409,652	+		CCNA_03243	0.62	-1.3
3,409,671	-		CCNA_03243	0.63	-0.4
3,409,678	+		CCNA_03243	0.64	-1.7
3,409,692	-		CCNA_03243	0.65	-3.1
3,409,704	-		CCNA_03243	0.66	-0.9
3,409,704	-		CCNA_03243	0.66	-2.5
3,409,709	-		CCNA_03243	0.66	-3.6