Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02979

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
3,133,424	+		CCNA_02978	0.37	-0.7
3,133,432	+		CCNA_02978	0.37	+0.5
3,133,437	+		CCNA_02978	0.38	-1.4
3,133,439	-		CCNA_02978	0.38	-0.5
3,133,440	-		CCNA_02978	0.38	-1.2
3,133,442	+		CCNA_02978	0.38	+0.7
3,133,444	+		CCNA_02978	0.38	+1.4
3,133,450	-		CCNA_02978	0.39	-2.4
3,133,451	-		CCNA_02978	0.39	-1.6
3,133,455	+		CCNA_02978	0.39	+1.1
3,133,455	+		CCNA_02978	0.39	-1.0
3,133,495	+		CCNA_02978	0.42	-0.0
3,133,503	-		CCNA_02978	0.42	-1.7
3,133,513	+		CCNA_02978	0.43	-0.3
3,133,518	+		CCNA_02978	0.43	-0.6
3,133,521	-		CCNA_02978	0.43	-0.7
3,133,541	-		CCNA_02978	0.45	+1.7
3,133,674	+		CCNA_02978	0.54	+1.1
3,133,676	+		CCNA_02978	0.54	-0.4
3,133,684	-		CCNA_02978	0.54	-0.4
3,133,694	-		CCNA_02978	0.55	-0.7
3,133,694	-		CCNA_02978	0.55	+0.8
3,133,694	-		CCNA_02978	0.55	-0.8
3,133,745	-		CCNA_02978	0.59	-1.8
3,133,745	-		CCNA_02978	0.59	-0.0
3,133,788	-		CCNA_02978	0.61	+2.7
3,133,789	+		CCNA_02978	0.62	-0.9
3,133,807	-		CCNA_02978	0.63	+2.6
3,133,807	-		CCNA_02978	0.63	+2.2
3,133,807	-		CCNA_02978	0.63	+2.6
3,133,830	-		CCNA_02978	0.64	+1.6
3,133,849	+		CCNA_02978	0.66	-0.1
3,133,858	+		CCNA_02978	0.66	-0.7
3,133,878	+		CCNA_02978	0.68	+0.1
3,133,885	-		CCNA_02978	0.68	-1.2
3,134,006	-		CCNA_02978	0.76	-1.6
3,134,013	+		CCNA_02978	0.77	+1.6
3,134,015	+		CCNA_02978	0.77	-0.9
3,134,015	+		CCNA_02978	0.77	-0.1
3,134,015	+		CCNA_02978	0.77	+0.2
3,134,015	+		CCNA_02978	0.77	+0.1
3,134,015	+		CCNA_02978	0.77	+0.8
3,134,015	+		CCNA_02978	0.77	+0.4
3,134,015	+		CCNA_02978	0.77	+0.6
3,134,015	+		CCNA_02978	0.77	+0.5
3,134,015	+		CCNA_02978	0.77	+0.2
3,134,023	-		CCNA_02978	0.77	+1.3
3,134,023	-		CCNA_02978	0.77	+0.4
3,134,023	-		CCNA_02978	0.77	-1.2
3,134,023	-		CCNA_02978	0.77	+0.0
3,134,023	-		CCNA_02978	0.77	+0.5
3,134,023	-		CCNA_02978	0.77	+0.6
3,134,023	-		CCNA_02978	0.77	-0.6
3,134,060	+		CCNA_02978	0.80	+1.1
3,134,088	+		CCNA_02978	0.82	+2.0
3,134,166	-		CCNA_02978	0.87	-0.2
3,134,174	+		CCNA_02978	0.88	+2.6
3,134,177	-		CCNA_02978	0.88	+2.1
3,134,177	-		CCNA_02978	0.88	+2.0
3,134,187	-		CCNA_02978	0.88	-0.2
3,134,191	+		CCNA_02978	0.89	+0.5
3,134,191	+		CCNA_02978	0.89	-3.2
3,134,191	+		CCNA_02978	0.89	-0.9
3,134,191	+		CCNA_02978	0.89	-0.7
3,134,192	-		CCNA_02978	0.89	-1.9
3,134,196	+		CCNA_02978	0.89	-1.4
3,134,199	-		CCNA_02978	0.89	-0.6
3,134,199	-		CCNA_02978	0.89	-2.0
3,134,199	-		CCNA_02978	0.89	-1.1
3,134,204	-		CCNA_02978	0.90	+0.6
3,134,239	+				+1.6
3,134,258	+				-1.2
3,134,258	+				+1.6
3,134,280	+				-2.0
3,134,289	-				-0.3
3,134,358	+				-2.3
3,134,407	+				-0.5
3,134,407	+				-0.0
3,134,407	+				-2.0
3,134,407	+				+0.1
3,134,410	-				+0.8
3,134,415	-				+2.5
3,134,415	-				+2.0
3,134,415	-				+1.1
3,134,415	-				+0.7
3,134,419	+				-1.9
3,134,419	+				-0.3
3,134,419	+				-2.1
3,134,419	+				-0.9
3,134,419	+				-2.3
3,134,419	+				+0.3
3,134,419	+				+0.7
3,134,419	+				+0.1
3,134,419	+				+2.1
3,134,419	+				-0.7
3,134,419	+				-2.3
3,134,419	+				-2.8
3,134,419	+				-0.5
3,134,419	+				-0.7
3,134,427	-				+0.8
3,134,427	-				+0.4
3,134,427	-				+1.1
3,134,427	-				+0.7
3,134,427	-				+1.4
3,134,427	-				+1.2
3,134,427	-				+1.1
3,134,427	-				-3.2
3,134,427	-				+0.7
3,134,427	-				+2.4
3,134,427	-				+0.7
3,134,427	-				-0.6
3,134,427	-				+0.0
3,134,427	-				+0.7
3,134,427	-				+0.6
3,134,427	-				-0.1
3,134,438	+				+1.1
3,134,448	-				+1.0
3,134,491	-				+0.8
3,134,531	-				+1.7
3,134,551	-		CCNA_02979	0.11	+1.8
3,134,635	+		CCNA_02979	0.18	-0.7
3,134,678	-		CCNA_02979	0.22	+1.8
3,134,683	-		CCNA_02979	0.22	+1.0
3,134,683	-		CCNA_02979	0.22	+1.5
3,134,683	-		CCNA_02979	0.22	+1.2
3,134,683	-		CCNA_02979	0.22	+2.1
3,134,683	-		CCNA_02979	0.22	+1.2
3,134,683	-		CCNA_02979	0.22	+0.5
3,134,683	-		CCNA_02979	0.22	+2.7
3,134,683	-		CCNA_02979	0.22	+1.4
3,134,683	-		CCNA_02979	0.22	+1.3
3,134,683	-		CCNA_02979	0.22	+0.8
3,134,715	-		CCNA_02979	0.25	+2.1
3,134,717	+		CCNA_02979	0.25	+0.2
3,134,754	+		CCNA_02979	0.28	-0.2
3,134,762	+		CCNA_02979	0.29	-2.5
3,134,779	-		CCNA_02979	0.30	+2.5
3,134,779	-		CCNA_02979	0.30	+0.5
3,134,785	+		CCNA_02979	0.31	+0.8
3,134,808	-		CCNA_02979	0.33	+1.4
3,134,873	-		CCNA_02979	0.38	+1.5
3,134,873	-		CCNA_02979	0.38	+2.1
3,134,873	-		CCNA_02979	0.38	+1.1
3,134,882	+		CCNA_02979	0.39	-0.1
3,134,961	-		CCNA_02979	0.46	+0.7
3,135,057	+		CCNA_02979	0.54	-0.0
3,135,075	+		CCNA_02979	0.55	-0.9
3,135,091	+		CCNA_02979	0.57	+0.9
3,135,091	+		CCNA_02979	0.57	-0.8
3,135,094	-		CCNA_02979	0.57	+1.8
3,135,117	+		CCNA_02979	0.59	+0.3
3,135,122	+		CCNA_02979	0.59	+1.7
3,135,125	-		CCNA_02979	0.59	+1.3
3,135,134	-		CCNA_02979	0.60	+2.0
3,135,148	+		CCNA_02979	0.61	-0.9
3,135,156	-		CCNA_02979	0.62	+1.6
3,135,161	-		CCNA_02979	0.62	+0.7
3,135,162	+		CCNA_02979	0.63	-0.5
3,135,167	+		CCNA_02979	0.63	-2.5
3,135,167	+		CCNA_02979	0.63	-0.9
3,135,199	-		CCNA_02979	0.66	-0.5
3,135,210	+		CCNA_02979	0.67	+2.1
3,135,222	+		CCNA_02979	0.68	+0.2
3,135,222	+		CCNA_02979	0.68	-0.0
3,135,222	+		CCNA_02979	0.68	+0.1
3,135,222	+		CCNA_02979	0.68	-0.9
3,135,225	-		CCNA_02979	0.68	+1.1
3,135,225	-		CCNA_02979	0.68	+0.9
3,135,230	-		CCNA_02979	0.68	+0.5
3,135,230	-		CCNA_02979	0.68	-0.3
3,135,230	-		CCNA_02979	0.68	+1.1
3,135,235	-		CCNA_02979	0.69	+0.6
3,135,280	+		CCNA_02979	0.72	+1.0
3,135,280	+		CCNA_02979	0.72	+0.6
3,135,280	+		CCNA_02979	0.72	+1.4
3,135,280	+		CCNA_02979	0.72	+0.3
3,135,288	-		CCNA_02979	0.73	-0.2
3,135,288	-		CCNA_02979	0.73	-0.5
3,135,288	-		CCNA_02979	0.73	+0.1
3,135,288	-		CCNA_02979	0.73	+0.7
3,135,288	-		CCNA_02979	0.73	-0.7
3,135,310	-		CCNA_02979	0.75	-0.4
3,135,318	+				+1.1
3,135,331	-		CCNA_02979	0.77	+0.7
3,135,331	-		CCNA_02979	0.77	+1.6
3,135,338	-		CCNA_02979	0.77	+0.1
3,135,342	+		CCNA_02979	0.78	-2.0
3,135,355	+		CCNA_02979	0.79	-2.0
3,135,387	+		CCNA_02979	0.82	-0.5
3,135,395	-		CCNA_02979	0.82	+1.8
3,135,395	-		CCNA_02979	0.82	-1.2
3,135,400	+		CCNA_02979	0.83	-1.7
3,135,407	-		CCNA_02979	0.83	-0.2
3,135,408	-		CCNA_02979	0.83	+1.0
3,135,408	-		CCNA_02979	0.83	+2.6
3,135,408	-		CCNA_02979	0.83	+0.3
3,135,413	-		CCNA_02979	0.84	-0.4
3,135,426	-		CCNA_02979	0.85	+2.5
3,135,460	-		CCNA_02979	0.88	+0.9
3,135,463	+		CCNA_02979	0.88	+0.6
3,135,465	-				+2.1
3,135,471	-		CCNA_02979	0.89	+2.4
3,135,478	+		CCNA_02979	0.89	-0.8
3,135,485	-		CCNA_02979	0.90	+0.3
3,135,493	+				+2.1
3,135,493	+				-1.4
3,135,508	-				+0.5
3,135,587	-				+1.7
3,135,587	-				+2.8
3,135,594	-				+1.6
3,135,625	+				+1.1
3,135,633	+				-1.4
3,135,701	+		CCNA_02980	0.15	-0.5
3,135,706	+		CCNA_02980	0.16	-1.1
3,135,710	-		CCNA_02980	0.16	+2.5
3,135,710	-		CCNA_02980	0.16	+2.6
3,135,748	-		CCNA_02980	0.21	+3.2
3,135,748	-		CCNA_02980	0.21	+2.8
3,135,748	-		CCNA_02980	0.21	+2.5
3,135,806	-		CCNA_02980	0.28	+2.1
3,135,819	+		CCNA_02980	0.30	-0.1
3,135,827	-		CCNA_02980	0.31	+2.3
3,135,827	-		CCNA_02980	0.31	+2.6
3,135,832	-		CCNA_02980	0.32	+2.5
3,135,846	-		CCNA_02980	0.33	+2.5
3,135,853	-		CCNA_02980	0.34	+2.7
3,135,871	-		CCNA_02980	0.37	+4.9
3,135,881	-		CCNA_02980	0.38	+2.7
3,135,884	+		CCNA_02980	0.38	+1.1
3,135,891	-		CCNA_02980	0.39	+2.4
3,135,929	-		CCNA_02980	0.44	+2.8
3,135,931	-		CCNA_02980	0.44	+3.3
3,135,931	-		CCNA_02980	0.44	+2.8
3,135,981	+		CCNA_02980	0.51	-0.3
3,135,989	-		CCNA_02980	0.52	+1.9
3,135,989	-		CCNA_02980	0.52	+3.0
3,136,006	-		CCNA_02980	0.54	+3.0
3,136,006	-		CCNA_02980	0.54	+2.5
3,136,007	-		CCNA_02980	0.54	+2.8
3,136,014	-		CCNA_02980	0.55	+2.7
3,136,024	+		CCNA_02980	0.56	+0.1
3,136,032	+		CCNA_02980	0.57	+1.1
3,136,040	-		CCNA_02980	0.58	+3.0
3,136,054	+		CCNA_02980	0.60	-1.4
3,136,057	-		CCNA_02980	0.60	+2.7
3,136,075	-		CCNA_02980	0.62	+2.8
3,136,102	+		CCNA_02980	0.66	-0.4
3,136,102	+		CCNA_02980	0.66	-0.9
3,136,112	+		CCNA_02980	0.67	-0.3
3,136,120	-		CCNA_02980	0.68	+2.9
3,136,141	-		CCNA_02980	0.71	+2.9
3,136,170	+		CCNA_02980	0.74	-0.0
3,136,171	-		CCNA_02980	0.74	+1.2
3,136,178	-		CCNA_02980	0.75	+2.7
3,136,207	+		CCNA_02980	0.79	-1.9
3,136,213	+		CCNA_02980	0.80	+1.3
3,136,221	-		CCNA_02980	0.81	+2.2
3,136,248	-		CCNA_02980	0.84	+2.3
3,136,252	+		CCNA_02980	0.85	-2.8
3,136,253	-		CCNA_02980	0.85	+2.8
3,136,262	+		CCNA_02980	0.86	-1.7
3,136,277	+		CCNA_02980	0.88	-2.0
3,136,283	-		CCNA_02980	0.89	+2.2
3,136,285	-		CCNA_02980	0.89	+2.5
3,136,285	-		CCNA_02980	0.89	+2.1
3,136,317	+				-1.1
3,136,318	-				+3.3
3,136,325	-				+1.4
3,136,335	+				+0.5
3,136,361	+				-0.8
3,136,363	-				+1.6
3,136,363	-				+1.0
3,136,379	+				+1.4
3,136,387	-				-1.2
3,136,387	-				+1.0
3,136,387	-				-0.7
3,136,387	-				+0.7
3,136,406	+				+0.6
3,136,414	-				+0.0
3,136,414	-				+0.6
3,136,435	+				+2.3
3,136,583	+		CCNA_02981	0.23	+0.8