Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02951

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
3,110,181	+		CCNA_02950	0.23	+1.7
3,110,184	-		CCNA_02950	0.23	-1.4
3,110,216	-		CCNA_02950	0.26	-1.5
3,110,231	-		CCNA_02950	0.27	+2.6
3,110,239	-		CCNA_02950	0.28	+1.2
3,110,306	+		CCNA_02950	0.33	+3.0
3,110,309	-		CCNA_02950	0.33	-0.4
3,110,348	-		CCNA_02950	0.36	+1.2
3,110,359	+		CCNA_02950	0.37	-0.2
3,110,373	+		CCNA_02950	0.38	+0.3
3,110,431	-		CCNA_02950	0.43	+1.0
3,110,454	+		CCNA_02950	0.45	+0.3
3,110,461	-		CCNA_02950	0.45	-0.9
3,110,461	-		CCNA_02950	0.45	-1.3
3,110,461	-		CCNA_02950	0.45	-1.5
3,110,464	-		CCNA_02950	0.45	-1.0
3,110,473	-		CCNA_02950	0.46	-1.5
3,110,475	+		CCNA_02950	0.46	+0.5
3,110,483	-		CCNA_02950	0.47	+0.3
3,110,483	-		CCNA_02950	0.47	-0.2
3,110,496	-		CCNA_02950	0.48	-0.7
3,110,553	+		CCNA_02950	0.52	+2.5
3,110,554	-		CCNA_02950	0.53	+1.4
3,110,558	+		CCNA_02950	0.53	+1.1
3,110,566	-		CCNA_02950	0.54	+2.0
3,110,582	+		CCNA_02950	0.55	+0.3
3,110,669	+		CCNA_02950	0.62	+0.8
3,110,669	+		CCNA_02950	0.62	+2.2
3,110,669	+		CCNA_02950	0.62	+0.4
3,110,669	+		CCNA_02950	0.62	+1.7
3,110,669	+		CCNA_02950	0.62	+0.5
3,110,669	+		CCNA_02950	0.62	-0.4
3,110,669	+		CCNA_02950	0.62	-0.2
3,110,669	+		CCNA_02950	0.62	+2.7
3,110,677	-		CCNA_02950	0.62	-1.8
3,110,677	-		CCNA_02950	0.62	+2.2
3,110,687	+		CCNA_02950	0.63	+2.2
3,110,725	+		CCNA_02950	0.66	-0.1
3,110,736	+		CCNA_02950	0.67	+0.7
3,110,758	+		CCNA_02950	0.69	+0.1
3,110,761	-		CCNA_02950	0.69	+2.2
3,110,769	+		CCNA_02950	0.70	+1.7
3,110,777	-		CCNA_02950	0.70	+0.8
3,110,779	+		CCNA_02950	0.70	+0.8
3,110,789	+		CCNA_02950	0.71	-1.2
3,110,805	+		CCNA_02950	0.72	+0.2
3,110,809	+		CCNA_02950	0.73	-0.3
3,110,809	+		CCNA_02950	0.73	-0.6
3,110,809	+		CCNA_02950	0.73	-1.1
3,110,809	+		CCNA_02950	0.73	+1.2
3,110,817	-		CCNA_02950	0.73	+0.3
3,110,827	+		CCNA_02950	0.74	+1.4
3,110,833	+		CCNA_02950	0.75	-0.8
3,110,851	-		CCNA_02950	0.76	-0.8
3,110,851	-		CCNA_02950	0.76	-0.2
3,110,900	+		CCNA_02950	0.80	+0.7
3,110,904	-		CCNA_02950	0.80	-0.2
3,110,915	-		CCNA_02950	0.81	+1.1
3,110,999	-		CCNA_02950	0.88	+5.0
3,111,001	-		CCNA_02950	0.88	+0.8
3,111,015	-		CCNA_02950	0.89	-2.8
3,111,060	+				+1.5
3,111,060	+				+2.0
3,111,060	-				-0.7
3,111,091	-				+0.9
3,111,092	-				+1.4
3,111,097	-				-1.4
3,111,097	-				+0.6
3,111,097	-				+0.4
3,111,097	-				-0.4
3,111,099	+				+2.5
3,111,099	+				+0.8
3,111,099	+				+2.0
3,111,107	-				+2.0
3,111,107	-				-0.5
3,111,202	+				-0.2
3,111,208	+				+1.1
3,111,210	-				+1.8
3,111,282	+				+4.2
3,111,287	-		CCNA_02951	0.19	+2.5
3,111,305	-		CCNA_02951	0.22	-0.8
3,111,321	+		CCNA_02951	0.24	+1.9
3,111,324	-		CCNA_02951	0.25	-0.5
3,111,375	-		CCNA_02951	0.32	+1.6
3,111,392	+		CCNA_02951	0.34	+4.0
3,111,397	+		CCNA_02951	0.35	+2.3
3,111,405	-		CCNA_02951	0.36	+2.6
3,111,463	+		CCNA_02951	0.44	+1.8
3,111,463	+		CCNA_02951	0.44	+1.2
3,111,464	+		CCNA_02951	0.44	+2.0
3,111,480	-		CCNA_02951	0.47	+0.7
3,111,536	+		CCNA_02951	0.55	+2.3
3,111,556	+		CCNA_02951	0.57	+2.6
3,111,580	-		CCNA_02951	0.61	+0.6
3,111,585	+		CCNA_02951	0.62	+1.6
3,111,637	-		CCNA_02951	0.69	-1.2
3,111,648	+		CCNA_02951	0.70	+2.2
3,111,655	+		CCNA_02951	0.71	+0.1
3,111,655	+		CCNA_02951	0.71	+0.6
3,111,655	+		CCNA_02951	0.71	+3.7
3,111,655	+		CCNA_02951	0.71	+4.0
3,111,655	+		CCNA_02951	0.71	+0.1
3,111,655	+		CCNA_02951	0.71	+1.4
3,111,655	+		CCNA_02951	0.71	-0.2
3,111,657	+		CCNA_02951	0.72	+1.7
3,111,663	-		CCNA_02951	0.73	+1.3
3,111,663	-		CCNA_02951	0.73	-1.5
3,111,706	+		CCNA_02951	0.79	+1.4
3,111,714	-		CCNA_02951	0.80	+2.3
3,111,741	-		CCNA_02951	0.84	+1.3
3,111,741	-		CCNA_02951	0.84	+1.0
3,111,741	-		CCNA_02951	0.84	-2.0
3,111,759	+		CCNA_02951	0.86	+1.3
3,111,768	+		CCNA_02951	0.87	+0.8
3,111,776	-		CCNA_02951	0.89	+1.3
3,111,781	-		CCNA_02951	0.89	-0.3
3,111,830	-				-0.5
3,111,945	+				+2.1
3,111,973	+				+0.3
3,111,981	+				+1.1
3,111,981	+				+1.2
3,111,989	-				+0.6
3,111,989	-				+0.6
3,111,989	-				+4.0
3,111,994	+				+2.7
3,112,002	-				-2.4
3,112,002	-				-1.7
3,112,020	+				+0.8
3,112,030	+				+0.4
3,112,030	+				+0.6
3,112,038	-				+1.0
3,112,049	+				-1.0
3,112,051	+				+0.6
3,112,138	+		CCNA_02952	0.20	-2.4
3,112,160	-		CCNA_02952	0.37	+0.6
3,112,160	-		CCNA_02952	0.37	+0.9
3,112,268	+				+0.1
3,112,287	+				+0.9
3,112,336	+		CCNA_02953	0.10	+1.3
3,112,336	+		CCNA_02953	0.10	+0.1
3,112,341	+		CCNA_02953	0.11	-1.9
3,112,344	-		CCNA_02953	0.11	-1.2
3,112,344	-		CCNA_02953	0.11	-1.5
3,112,344	-		CCNA_02953	0.11	+0.3
3,112,344	-		CCNA_02953	0.11	-0.3
3,112,349	-		CCNA_02953	0.12	+0.1
3,112,351	+		CCNA_02953	0.12	-0.2
3,112,351	+		CCNA_02953	0.12	-1.4
3,112,351	+		CCNA_02953	0.12	-2.0
3,112,351	+		CCNA_02953	0.12	-0.2
3,112,363	+		CCNA_02953	0.13	-1.7
3,112,363	+		CCNA_02953	0.13	-1.4
3,112,371	-		CCNA_02953	0.14	-0.4
3,112,422	-		CCNA_02953	0.19	-1.9
3,112,478	+		CCNA_02953	0.25	-0.4
3,112,496	+		CCNA_02953	0.27	-1.3
3,112,504	-		CCNA_02953	0.28	-0.4
3,112,517	-		CCNA_02953	0.29	+0.1
3,112,522	-		CCNA_02953	0.30	-1.9
3,112,562	+		CCNA_02953	0.34	-0.5
3,112,570	-		CCNA_02953	0.35	-1.9
3,112,570	-		CCNA_02953	0.35	+0.3
3,112,588	+		CCNA_02953	0.36	+0.0
3,112,595	+		CCNA_02953	0.37	+0.1
3,112,684	+		CCNA_02953	0.46	-0.3
3,112,751	+		CCNA_02953	0.53	-0.2
3,112,817	+		CCNA_02953	0.60	-1.0