Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02405

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
2,547,318	+		CCNA_02403	0.85	+1.3
2,547,352	+		CCNA_02403	0.88	+2.5
2,547,353	+		CCNA_02403	0.88	+2.6
2,547,355	-		CCNA_02403	0.89	+1.9
2,547,362	-		CCNA_02403	0.89	+2.0
2,547,457	+				+2.5
2,547,462	+				+2.5
2,547,465	-				-2.2
2,547,467	+				+1.2
2,547,467	+				-0.1
2,547,470	-				-2.4
2,547,475	+				+1.7
2,547,475	-				-1.7
2,547,480	-				+0.6
2,547,509	-				-0.9
2,547,544	+				+1.9
2,547,551	+				+2.5
2,547,612	-		CCNA_02404	0.16	+1.5
2,547,621	-		CCNA_02404	0.17	+0.2
2,547,638	+		CCNA_02404	0.19	+3.2
2,547,638	+		CCNA_02404	0.19	+1.1
2,547,646	-		CCNA_02404	0.20	+2.0
2,547,646	-		CCNA_02404	0.20	+3.6
2,547,646	-		CCNA_02404	0.20	+2.4
2,547,646	-		CCNA_02404	0.20	+3.0
2,547,656	-		CCNA_02404	0.21	-0.5
2,547,661	-		CCNA_02404	0.22	+1.6
2,547,663	+		CCNA_02404	0.22	+2.3
2,547,682	-		CCNA_02404	0.24	-0.3
2,547,687	-		CCNA_02404	0.25	+1.1
2,547,768	+		CCNA_02404	0.35	+4.9
2,547,768	+		CCNA_02404	0.35	+1.2
2,547,776	-		CCNA_02404	0.36	+0.3
2,547,776	-		CCNA_02404	0.36	-0.3
2,547,776	-		CCNA_02404	0.36	-0.2
2,547,776	-		CCNA_02404	0.36	-0.8
2,547,809	+		CCNA_02404	0.40	+1.6
2,547,811	-		CCNA_02404	0.40	-0.7
2,547,817	-		CCNA_02404	0.41	-0.9
2,547,817	-		CCNA_02404	0.41	-0.6
2,547,840	+		CCNA_02404	0.43	+2.7
2,547,849	-		CCNA_02404	0.44	+0.6
2,547,889	+		CCNA_02404	0.49	+2.5
2,547,914	-		CCNA_02404	0.52	+1.8
2,547,940	-		CCNA_02404	0.55	+0.2
2,547,949	-		CCNA_02404	0.56	+0.4
2,547,976	+		CCNA_02404	0.59	+2.4
2,547,976	+		CCNA_02404	0.59	+3.0
2,547,976	+		CCNA_02404	0.59	+2.2
2,547,978	-		CCNA_02404	0.60	+2.1
2,547,984	-		CCNA_02404	0.60	-1.8
2,547,984	-		CCNA_02404	0.60	-0.9
2,548,037	+		CCNA_02404	0.67	+2.5
2,548,037	+		CCNA_02404	0.67	+0.1
2,548,037	+		CCNA_02404	0.67	+2.2
2,548,037	+		CCNA_02404	0.67	+2.7
2,548,045	-		CCNA_02404	0.68	+0.1
2,548,045	-		CCNA_02404	0.68	-1.2
2,548,055	-		CCNA_02404	0.69	-0.9
2,548,121	+		CCNA_02404	0.77	+2.7
2,548,121	+		CCNA_02404	0.77	+3.4
2,548,121	+		CCNA_02404	0.77	+3.2
2,548,129	-		CCNA_02404	0.78	+1.0
2,548,129	-		CCNA_02404	0.78	+2.1
2,548,137	+		CCNA_02404	0.79	+2.4
2,548,182	+		CCNA_02404	0.84	+2.9
2,548,190	+		CCNA_02404	0.85	+2.6
2,548,198	-		CCNA_02404	0.86	-0.3
2,548,232	+				+2.0
2,548,247	+				+2.1
2,548,250	-				+1.1
2,548,296	+				-0.2
2,548,340	+				+1.7
2,548,348	-				+0.7
2,548,348	-				+1.4
2,548,362	+				+1.3
2,548,364	+				+3.0
2,548,364	+				+5.3
2,548,372	-				+0.7
2,548,372	-				-3.1
2,548,372	-				+0.7
2,548,372	-				+0.7
2,548,372	-				-2.5
2,548,379	-				+0.7
2,548,379	-				+0.7
2,548,410	-		CCNA_02405	0.10	+3.5
2,548,428	+		CCNA_02405	0.12	+1.7
2,548,462	+		CCNA_02405	0.16	+3.3
2,548,466	+		CCNA_02405	0.16	+2.1
2,548,470	-		CCNA_02405	0.17	+2.0
2,548,529	+		CCNA_02405	0.23	+1.7
2,548,529	+		CCNA_02405	0.23	+2.0
2,548,573	+		CCNA_02405	0.28	+1.6
2,548,573	+		CCNA_02405	0.28	+2.8
2,548,581	-		CCNA_02405	0.28	+4.1
2,548,600	+		CCNA_02405	0.30	+3.4
2,548,600	+		CCNA_02405	0.30	+3.1
2,548,616	-		CCNA_02405	0.32	+0.1
2,548,632	+		CCNA_02405	0.34	+3.2
2,548,640	-		CCNA_02405	0.35	+0.0
2,548,644	+		CCNA_02405	0.35	+3.3
2,548,647	-		CCNA_02405	0.35	-0.4
2,548,657	-		CCNA_02405	0.37	+0.3
2,548,667	+		CCNA_02405	0.38	+2.0
2,548,727	+		CCNA_02405	0.44	+2.2
2,548,748	+		CCNA_02405	0.46	+1.9
2,548,756	-		CCNA_02405	0.47	+0.2
2,548,767	+		CCNA_02405	0.48	+1.2
2,548,767	+		CCNA_02405	0.48	+3.8
2,548,767	+		CCNA_02405	0.48	+3.2
2,548,770	-		CCNA_02405	0.49	+3.1
2,548,775	-		CCNA_02405	0.49	+2.5
2,548,775	-		CCNA_02405	0.49	+0.7
2,548,780	-		CCNA_02405	0.50	-0.2
2,548,834	-		CCNA_02405	0.55	+1.1
2,548,845	+		CCNA_02405	0.57	+2.3
2,548,845	+		CCNA_02405	0.57	-1.7
2,548,853	-		CCNA_02405	0.57	+0.7
2,548,856	+		CCNA_02405	0.58	+2.0
2,548,909	+		CCNA_02405	0.63	+2.4
2,548,917	+		CCNA_02405	0.64	+2.0
2,548,917	+		CCNA_02405	0.64	+3.4
2,548,917	-		CCNA_02405	0.64	+0.2
2,548,925	-		CCNA_02405	0.65	+2.7
2,548,950	+		CCNA_02405	0.68	+2.6
2,548,972	+		CCNA_02405	0.70	+2.2
2,548,972	+		CCNA_02405	0.70	+3.0
2,549,013	-		CCNA_02405	0.74	+1.1
2,549,013	-		CCNA_02405	0.74	+3.7
2,549,013	-		CCNA_02405	0.74	+1.1
2,549,015	+		CCNA_02405	0.75	+3.0
2,549,015	+		CCNA_02405	0.75	+3.5
2,549,039	-		CCNA_02405	0.77	+1.7
2,549,048	+		CCNA_02405	0.78	+2.6
2,549,056	-		CCNA_02405	0.79	+2.6
2,549,140	+		CCNA_02405	0.88	+3.1
2,549,151	-		CCNA_02405	0.89	+2.5
2,549,199	-				+1.9
2,549,240	+				+2.2
2,549,240	+				+2.9
2,549,278	-				+2.2
2,549,292	-				+1.6
2,549,298	-				-0.6
2,549,331	+		CCNA_02406	0.13	+3.3
2,549,331	+		CCNA_02406	0.13	+2.1
2,549,364	+		CCNA_02406	0.18	+2.1
2,549,364	+		CCNA_02406	0.18	+1.6
2,549,420	+		CCNA_02406	0.26	+3.5
2,549,430	+		CCNA_02406	0.28	+2.2
2,549,430	-		CCNA_02406	0.28	+2.9
2,549,430	-		CCNA_02406	0.28	+2.5
2,549,439	-		CCNA_02406	0.29	+2.1
2,549,446	-		CCNA_02406	0.30	+0.4
2,549,447	+		CCNA_02406	0.30	+4.1
2,549,455	-		CCNA_02406	0.32	+0.6
2,549,455	-		CCNA_02406	0.32	+0.5
2,549,538	+		CCNA_02406	0.44	+2.7
2,549,546	-		CCNA_02406	0.46	+0.9
2,549,546	-		CCNA_02406	0.46	+0.9
2,549,582	+		CCNA_02406	0.51	+2.3
2,549,582	+		CCNA_02406	0.51	+1.3
2,549,582	+		CCNA_02406	0.51	+2.3
2,549,590	-		CCNA_02406	0.52	+2.8
2,549,625	+		CCNA_02406	0.58	+1.4
2,549,628	-		CCNA_02406	0.58	+1.1
2,549,634	-		CCNA_02406	0.59	+0.2
2,549,651	+		CCNA_02406	0.62	+3.3
2,549,651	+		CCNA_02406	0.62	+3.2
2,549,659	-		CCNA_02406	0.63	+1.0
2,549,659	-		CCNA_02406	0.63	-0.7
2,549,666	-		CCNA_02406	0.64	+2.2
2,549,691	-		CCNA_02406	0.68	+2.9
2,549,694	+		CCNA_02406	0.68	+2.5
2,549,700	+		CCNA_02406	0.69	+2.7
2,549,702	-		CCNA_02406	0.70	+1.7
2,549,702	-		CCNA_02406	0.70	-0.5
2,549,712	-		CCNA_02406	0.71	+1.7
2,549,772	-		CCNA_02406	0.80	+1.9
2,549,779	+		CCNA_02406	0.81	+2.7
2,549,813	-		CCNA_02406	0.87	+1.8
2,549,828	-		CCNA_02406	0.89	+1.0
2,549,828	-		CCNA_02406	0.89	+1.6
2,549,838	+				+2.0
2,549,848	+				+2.5
2,549,855	+				+3.1
2,549,863	-				+1.1
2,549,901	-				-1.6
2,549,913	-				-0.2
2,549,926	+				-0.9
2,549,934	-				+1.5
2,549,950	+				+0.2
2,549,950	+				+0.4
2,549,950	+				+0.3
2,549,950	+				-1.2
2,549,950	+				+0.9
2,549,950	+				-0.1
2,549,950	+				-0.7
2,549,955	+				+0.6
2,549,955	+				+2.3
2,549,955	+				+0.0
2,549,958	-				-0.6
2,549,963	-				+0.6
2,549,963	-				+0.6
2,549,968	-				+0.6
2,549,974	+		CCNA_02407	0.10	+1.9
2,549,974	+		CCNA_02407	0.10	+1.4
2,549,974	+		CCNA_02407	0.10	-1.6
2,549,982	-		CCNA_02407	0.11	+3.7
2,550,097	-		CCNA_02407	0.26	+0.1
2,550,103	+		CCNA_02407	0.27	+0.8
2,550,103	+		CCNA_02407	0.27	+0.3
2,550,103	+				-0.5
2,550,103	+		CCNA_02407	0.27	-1.4
2,550,103	+		CCNA_02407	0.27	+0.8
2,550,111	-		CCNA_02407	0.28	+0.1
2,550,111	-		CCNA_02407	0.28	+0.4
2,550,111	-		CCNA_02407	0.28	+0.9
2,550,111	-		CCNA_02407	0.28	+0.5
2,550,111	-		CCNA_02407	0.28	+0.7
2,550,118	-		CCNA_02407	0.29	+0.9
2,550,145	+		CCNA_02407	0.33	+0.5
2,550,191	+		CCNA_02407	0.39	-1.3
2,550,199	-		CCNA_02407	0.40	+1.3
2,550,199	-		CCNA_02407	0.40	-0.2
2,550,199	-		CCNA_02407	0.40	+0.4