Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01778

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
1,904,248	-		CCNA_01777	0.49	+0.3
1,904,277	+		CCNA_01777	0.51	+2.1
1,904,291	+		CCNA_01777	0.52	+1.7
1,904,291	+		CCNA_01777	0.52	+3.1
1,904,295	+		CCNA_01777	0.52	+2.2
1,904,299	-		CCNA_01777	0.52	-1.1
1,904,299	-		CCNA_01777	0.52	+0.4
1,904,299	-		CCNA_01777	0.52	-1.1
1,904,304	-		CCNA_01777	0.53	+0.4
1,904,337	-		CCNA_01777	0.55	+0.7
1,904,383	+		CCNA_01777	0.57	+0.6
1,904,391	-		CCNA_01777	0.58	+1.2
1,904,391	-		CCNA_01777	0.58	+0.5
1,904,399	-		CCNA_01777	0.58	+1.3
1,904,476	+		CCNA_01777	0.63	+0.4
1,904,480	-		CCNA_01777	0.63	-0.6
1,904,482	+		CCNA_01777	0.63	+2.4
1,904,485	-		CCNA_01777	0.63	+0.1
1,904,485	-		CCNA_01777	0.63	-0.1
1,904,485	-		CCNA_01777	0.63	-0.0
1,904,497	-		CCNA_01777	0.64	+0.8
1,904,527	-		CCNA_01777	0.66	-1.3
1,904,535	+		CCNA_01777	0.66	+2.7
1,904,566	+		CCNA_01777	0.68	+1.4
1,904,574	-		CCNA_01777	0.69	+0.8
1,904,593	-		CCNA_01777	0.70	-0.8
1,904,708	+		CCNA_01777	0.77	+1.3
1,904,713	+		CCNA_01777	0.77	+0.3
1,904,721	-		CCNA_01777	0.77	-2.7
1,904,721	-		CCNA_01777	0.77	+1.0
1,904,721	-		CCNA_01777	0.77	-1.7
1,904,754	+		CCNA_01777	0.79	+1.7
1,904,785	-		CCNA_01777	0.81	-0.6
1,904,833	-		CCNA_01777	0.84	-2.5
1,904,855	+		CCNA_01777	0.85	+1.3
1,904,863	-		CCNA_01777	0.86	-0.7
1,904,867	+		CCNA_01777	0.86	+1.6
1,904,880	-		CCNA_01777	0.87	-2.6
1,904,898	+		CCNA_01777	0.88	+2.4
1,904,924	+		CCNA_01777	0.90	+2.1
1,904,932	-				-0.9
1,904,932	-				-1.3
1,904,998	+				-2.7
1,905,095	+				+0.5
1,905,095	+				-0.5
1,905,095	+				+0.5
1,905,095	+				+2.0
1,905,096	-				-1.4
1,905,258	-				+1.4
1,905,268	+				+1.5
1,905,319	+				+1.4
1,905,509	+		CCNA_01778	0.24	+2.6
1,905,512	-		CCNA_01778	0.24	-0.2
1,905,517	-		CCNA_01778	0.24	-1.9
1,905,520	+		CCNA_01778	0.24	+1.3
1,905,566	-		CCNA_01778	0.28	-0.8
1,905,667	+		CCNA_01778	0.36	+0.8
1,905,667	+		CCNA_01778	0.36	+1.7
1,905,667	+		CCNA_01778	0.36	+2.4
1,905,667	+		CCNA_01778	0.36	+0.9
1,905,667	+		CCNA_01778	0.36	+0.1
1,905,667	+		CCNA_01778	0.36	-0.6
1,905,675	-		CCNA_01778	0.36	-0.0
1,905,675	-		CCNA_01778	0.36	-0.4
1,905,704	-		CCNA_01778	0.39	+0.8
1,905,725	+		CCNA_01778	0.40	-0.3
1,905,727	+		CCNA_01778	0.40	+2.4
1,905,740	-		CCNA_01778	0.41	+0.9
1,905,761	+		CCNA_01778	0.43	+1.5
1,905,827	+		CCNA_01778	0.48	+0.2
1,905,854	-		CCNA_01778	0.50	-0.2
1,905,882	+		CCNA_01778	0.52	+1.1
1,905,887	+		CCNA_01778	0.53	+1.8
1,905,897	+		CCNA_01778	0.54	+1.6
1,905,897	+		CCNA_01778	0.54	+1.1
1,905,897	+		CCNA_01778	0.54	+1.3
1,905,897	+		CCNA_01778	0.54	+1.7
1,905,897	+		CCNA_01778	0.54	+1.7
1,905,897	+		CCNA_01778	0.54	+1.5
1,905,897	+		CCNA_01778	0.54	+4.2
1,905,897	+		CCNA_01778	0.54	+1.3
1,905,897	+		CCNA_01778	0.54	+0.2
1,905,897	+		CCNA_01778	0.54	+1.2
1,905,898	+		CCNA_01778	0.54	+1.2
1,905,905	-		CCNA_01778	0.54	-0.9
1,905,905	-		CCNA_01778	0.54	+3.4
1,905,905	-		CCNA_01778	0.54	+0.6
1,905,905	-		CCNA_01778	0.54	-0.6
1,905,905	-		CCNA_01778	0.54	+0.4
1,905,905	-		CCNA_01778	0.54	-0.5
1,905,905	-		CCNA_01778	0.54	+0.4
1,905,905	-		CCNA_01778	0.54	-0.2
1,905,905	-		CCNA_01778	0.54	+0.8
1,905,907	+		CCNA_01778	0.54	+2.8
1,905,915	-		CCNA_01778	0.55	-0.8
1,905,915	-				+2.4
1,905,932	+		CCNA_01778	0.56	+1.5
1,905,983	+		CCNA_01778	0.60	+0.9
1,906,005	-		CCNA_01778	0.62	-1.7
1,906,011	-		CCNA_01778	0.62	-2.6
1,906,019	-		CCNA_01778	0.63	-1.2
1,906,028	+		CCNA_01778	0.64	+2.2
1,906,134	+		CCNA_01778	0.72	+1.0
1,906,159	+		CCNA_01778	0.74	+1.7
1,906,159	+		CCNA_01778	0.74	+0.9
1,906,161	+		CCNA_01778	0.74	+0.7
1,906,200	+		CCNA_01778	0.77	+1.9
1,906,202	+		CCNA_01778	0.77	+2.2
1,906,220	+		CCNA_01778	0.79	+1.2
1,906,220	+		CCNA_01778	0.79	+0.4
1,906,220	+		CCNA_01778	0.79	+1.4
1,906,227	+		CCNA_01778	0.79	+1.2
1,906,241	-		CCNA_01778	0.80	-0.1
1,906,248	-		CCNA_01778	0.81	-0.6
1,906,253	-		CCNA_01778	0.81	-2.4
1,906,270	+		CCNA_01778	0.82	+1.5
1,906,351	+		CCNA_01778	0.89	+0.5
1,906,353	+		CCNA_01778	0.89	+0.9
1,906,359	+		CCNA_01778	0.89	+0.1
1,906,367	-				-1.5
1,906,369	-				-0.2
1,906,485	-				+0.2
1,906,500	+				+0.7
1,906,562	-		CCNA_01779	0.12	+2.4
1,906,567	+		CCNA_01779	0.14	+0.6
1,906,576	-		CCNA_01779	0.17	+1.7
1,906,627	-		CCNA_01779	0.36	+1.5
1,906,666	-		CCNA_01779	0.51	+1.0
1,906,694	-		CCNA_01779	0.61	+1.1
1,906,694	-		CCNA_01779	0.61	+1.6
1,906,699	-		CCNA_01779	0.63	-0.0
1,906,746	+		CCNA_01779	0.80	-0.3
1,906,773	-				-1.1
1,906,779	+				+0.4
1,906,787	-				+1.8
1,906,802	+				-0.7
1,906,802	+				-1.6
1,906,808	-				+0.9
1,906,841	+				+2.4
1,906,843	-				+2.4
1,906,961	+				+1.9
1,906,974	-				+2.6
1,906,974	-				+3.3
1,907,052	+				+3.1
1,907,089	-				+3.8
1,907,109	+		CCNA_01780	0.10	+3.4
1,907,109	-		CCNA_01780	0.10	+4.4
1,907,117	-		CCNA_01780	0.11	+3.2
1,907,186	+		CCNA_01780	0.15	+3.2
1,907,189	-		CCNA_01780	0.16	+4.2
1,907,209	+		CCNA_01780	0.17	+3.7
1,907,284	+		CCNA_01780	0.22	+3.4
1,907,306	+		CCNA_01780	0.23	+3.4
1,907,306	+		CCNA_01780	0.23	+3.9
1,907,336	-		CCNA_01780	0.25	+4.1
1,907,430	+		CCNA_01780	0.32	+2.1