Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01230

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
1,356,102	+		CCNA_01229	0.32	+2.1
1,356,103	+		CCNA_01229	0.32	-1.0
1,356,103	+		CCNA_01229	0.32	+1.8
1,356,103	+		CCNA_01229	0.32	+0.9
1,356,103	+		CCNA_01229	0.32	+1.0
1,356,116	-		CCNA_01229	0.33	-2.9
1,356,130	-		CCNA_01229	0.34	-1.1
1,356,138	+		CCNA_01229	0.35	-1.2
1,356,138	+		CCNA_01229	0.35	-1.4
1,356,163	-		CCNA_01229	0.36	-2.6
1,356,178	+		CCNA_01229	0.37	-1.5
1,356,178	+		CCNA_01229	0.37	-1.5
1,356,191	+		CCNA_01229	0.38	-2.8
1,356,191	+		CCNA_01229	0.38	-1.4
1,356,191	+		CCNA_01229	0.38	-2.5
1,356,191	+		CCNA_01229	0.38	-2.6
1,356,199	-		CCNA_01229	0.39	-0.1
1,356,204	-		CCNA_01229	0.39	+3.5
1,356,204	-		CCNA_01229	0.39	+0.4
1,356,207	+		CCNA_01229	0.40	+0.4
1,356,348	+		CCNA_01229	0.50	-1.9
1,356,356	-		CCNA_01229	0.51	+0.1
1,356,356	-		CCNA_01229	0.51	+0.5
1,356,356	-		CCNA_01229	0.51	-1.8
1,356,375	+		CCNA_01229	0.52	-0.4
1,356,401	+		CCNA_01229	0.54	-1.5
1,356,401	+		CCNA_01229	0.54	-2.3
1,356,409	-		CCNA_01229	0.55	-1.1
1,356,409	-		CCNA_01229	0.55	+3.5
1,356,409	-		CCNA_01229	0.55	-1.0
1,356,409	-		CCNA_01229	0.55	-1.2
1,356,422	+		CCNA_01229	0.56	-2.4
1,356,422	+		CCNA_01229	0.56	+2.9
1,356,461	-		CCNA_01229	0.58	-1.8
1,356,498	+		CCNA_01229	0.61	-2.3
1,356,506	-		CCNA_01229	0.62	+0.7
1,356,506	-		CCNA_01229	0.62	-2.0
1,356,560	-		CCNA_01229	0.66	+1.5
1,356,606	+		CCNA_01229	0.69	+0.2
1,356,614	-		CCNA_01229	0.70	-0.6
1,356,614	-		CCNA_01229	0.70	+0.6
1,356,627	-		CCNA_01229	0.71	-0.6
1,356,636	-		CCNA_01229	0.71	+1.0
1,356,637	+		CCNA_01229	0.71	+0.4
1,356,637	+		CCNA_01229	0.71	-0.3
1,356,656	-		CCNA_01229	0.73	+0.1
1,356,663	+		CCNA_01229	0.73	+0.4
1,356,671	-		CCNA_01229	0.74	-1.4
1,356,687	+		CCNA_01229	0.75	-0.6
1,356,695	-		CCNA_01229	0.76	+0.9
1,356,695	-		CCNA_01229	0.76	-1.8
1,356,723	+		CCNA_01229	0.78	+0.0
1,356,723	+		CCNA_01229	0.78	-0.9
1,356,731	-		CCNA_01229	0.78	+0.4
1,356,731	-		CCNA_01229	0.78	+0.1
1,356,731	-		CCNA_01229	0.78	-1.5
1,356,731	-		CCNA_01229	0.78	-1.1
1,356,748	+		CCNA_01229	0.80	-0.4
1,356,829	+		CCNA_01229	0.86	-2.7
1,356,955	+				-0.1
1,356,955	+				+0.5
1,356,955	+				+0.7
1,356,963	-				-0.9
1,356,963	-				-1.6
1,356,963	-				-0.6
1,356,963	-				-1.1
1,356,975	-				-0.5
1,357,004	+				-0.5
1,357,004	+				-1.1
1,357,072	+				+0.2
1,357,074	+				+0.4
1,357,082	-				-0.1
1,357,190	+				-1.3
1,357,198	-				-0.4
1,357,198	-				+1.9
1,357,270	+		CCNA_01230	0.11	-1.7
1,357,324	+		CCNA_01230	0.14	-1.6
1,357,324	+		CCNA_01230	0.14	-1.7
1,357,357	+		CCNA_01230	0.16	-1.8
1,357,362	+		CCNA_01230	0.16	+2.9
1,357,364	+		CCNA_01230	0.16	-0.6
1,357,365	-		CCNA_01230	0.16	+0.5
1,357,365	-		CCNA_01230	0.16	-0.1
1,357,383	-		CCNA_01230	0.17	-2.0
1,357,415	+		CCNA_01230	0.19	-2.5
1,357,424	-		CCNA_01230	0.20	-0.5
1,357,443	+		CCNA_01230	0.21	-0.4
1,357,457	+		CCNA_01230	0.22	+0.2
1,357,504	-		CCNA_01230	0.25	+0.2
1,357,509	+		CCNA_01230	0.25	+0.3
1,357,515	-		CCNA_01230	0.25	-0.4
1,357,551	+		CCNA_01230	0.28	-0.9
1,357,551	+		CCNA_01230	0.28	-1.4
1,357,551	+		CCNA_01230	0.28	-0.6
1,357,551	+		CCNA_01230	0.28	-1.5
1,357,553	+		CCNA_01230	0.28	-0.2
1,357,595	+		CCNA_01230	0.30	-1.8
1,357,595	+		CCNA_01230	0.30	+3.9
1,357,597	+		CCNA_01230	0.30	-0.9
1,357,610	+				+1.9
1,357,665	-		CCNA_01230	0.34	-1.8
1,357,675	+		CCNA_01230	0.35	-1.1
1,357,675	+		CCNA_01230	0.35	+0.9
1,357,683	-		CCNA_01230	0.36	+1.6
1,357,683	-		CCNA_01230	0.36	+1.8
1,357,683	-		CCNA_01230	0.36	+1.7
1,357,683	-		CCNA_01230	0.36	+1.2
1,357,683	-		CCNA_01230	0.36	+0.8
1,357,683	-		CCNA_01230	0.36	+1.3
1,357,698	-		CCNA_01230	0.36	-0.4
1,357,746	+		CCNA_01230	0.39	-1.1
1,357,775	+		CCNA_01230	0.41	-0.2
1,357,783	-		CCNA_01230	0.42	-2.3
1,357,862	-		CCNA_01230	0.46	-1.1
1,357,889	+		CCNA_01230	0.48	-0.8
1,357,889	+		CCNA_01230	0.48	-1.8
1,357,894	+		CCNA_01230	0.48	-2.2
1,357,897	-		CCNA_01230	0.48	-0.2
1,357,897	-		CCNA_01230	0.48	-0.4
1,357,897	-		CCNA_01230	0.48	-0.1
1,357,985	+		CCNA_01230	0.54	+1.7
1,357,991	-		CCNA_01230	0.54	-2.1
1,357,997	+		CCNA_01230	0.54	-2.3
1,358,004	+		CCNA_01230	0.55	-1.4
1,358,045	+		CCNA_01230	0.57	-2.1
1,358,045	+		CCNA_01230	0.57	-1.2
1,358,045	+		CCNA_01230	0.57	-1.2
1,358,053	-		CCNA_01230	0.58	-1.4
1,358,053	-		CCNA_01230	0.58	-1.0
1,358,076	+		CCNA_01230	0.59	-2.0
1,358,084	+		CCNA_01230	0.60	-0.6
1,358,084	-		CCNA_01230	0.60	+0.4
1,358,137	+		CCNA_01230	0.63	+0.1
1,358,191	+		CCNA_01230	0.66	-1.9
1,358,276	+		CCNA_01230	0.71	+0.5
1,358,276	+		CCNA_01230	0.71	-1.3
1,358,281	+		CCNA_01230	0.72	+0.8
1,358,284	-		CCNA_01230	0.72	-2.9
1,358,284	-		CCNA_01230	0.72	+0.9
1,358,307	+		CCNA_01230	0.73	-2.4
1,358,307	+		CCNA_01230	0.73	-1.9
1,358,307	+		CCNA_01230	0.73	-0.6
1,358,307	+		CCNA_01230	0.73	+0.9
1,358,307	+		CCNA_01230	0.73	+1.9
1,358,307	+		CCNA_01230	0.73	-0.8
1,358,315	-		CCNA_01230	0.74	-1.8
1,358,315	-		CCNA_01230	0.74	-1.2
1,358,315	-		CCNA_01230	0.74	+0.1
1,358,315	-		CCNA_01230	0.74	+0.4
1,358,315	-		CCNA_01230	0.74	-3.0
1,358,339	-		CCNA_01230	0.75	-1.1
1,358,376	+		CCNA_01230	0.77	-0.3
1,358,396	-		CCNA_01230	0.79	-3.3
1,358,412	-		CCNA_01230	0.80	-1.6
1,358,412	-		CCNA_01230	0.80	-1.6
1,358,412	-		CCNA_01230	0.80	+0.0
1,358,414	-		CCNA_01230	0.80	-1.3
1,358,421	+		CCNA_01230	0.80	-0.6
1,358,424	+		CCNA_01230	0.80	-1.6
1,358,429	+		CCNA_01230	0.81	+1.9
1,358,429	+		CCNA_01230	0.81	-2.5
1,358,429	+		CCNA_01230	0.81	+0.6
1,358,437	-		CCNA_01230	0.81	-1.6
1,358,437	-		CCNA_01230	0.81	-1.8
1,358,437	-		CCNA_01230	0.81	-0.3
1,358,437	-		CCNA_01230	0.81	+0.4
1,358,437	-		CCNA_01230	0.81	-0.6
1,358,464	-		CCNA_01230	0.83	-1.2
1,358,473	+		CCNA_01230	0.83	-1.2
1,358,487	-		CCNA_01230	0.84	-0.9
1,358,539	+		CCNA_01230	0.87	+0.8
1,358,565	-		CCNA_01230	0.89	+1.4
1,358,569	+		CCNA_01230	0.89	-0.2
1,358,579	+		CCNA_01230	0.90	-1.4
1,358,587	-				-0.6
1,358,593	+				+1.2
1,358,717	+				+1.0
1,358,717	+				-0.4
1,358,720	-				-1.3
1,358,803	+				+0.5
1,358,811	-				-0.6
1,358,840	+		CCNA_01231	0.10	-0.3
1,358,908	-		CCNA_01231	0.17	-0.0
1,358,908	-		CCNA_01231	0.17	+0.1
1,358,927	+		CCNA_01231	0.19	+1.5
1,358,934	-		CCNA_01231	0.19	+0.5
1,358,958	-		CCNA_01231	0.22	-0.7
1,359,019	-		CCNA_01231	0.28	+1.0
1,359,071	+		CCNA_01231	0.33	+1.3
1,359,114	-		CCNA_01231	0.37	+0.8
1,359,152	+		CCNA_01231	0.41	-1.9
1,359,191	-		CCNA_01231	0.45	-0.0
1,359,221	+		CCNA_01231	0.47	+1.3
1,359,229	-		CCNA_01231	0.48	-0.4
1,359,231	-		CCNA_01231	0.48	-1.2
1,359,231	-		CCNA_01231	0.48	-0.6
1,359,233	+		CCNA_01231	0.49	+1.8
1,359,238	+		CCNA_01231	0.49	+0.6
1,359,250	+		CCNA_01231	0.50	-0.8
1,359,251	+		CCNA_01231	0.50	-1.0
1,359,253	-		CCNA_01231	0.51	+1.1
1,359,253	-		CCNA_01231	0.51	-0.0
1,359,270	+		CCNA_01231	0.52	-0.9
1,359,278	-		CCNA_01231	0.53	+2.0
1,359,278	-		CCNA_01231	0.53	-2.1
1,359,298	+		CCNA_01231	0.55	+1.4
1,359,306	-		CCNA_01231	0.56	-0.2
1,359,323	-		CCNA_01231	0.58	+1.7
1,359,331	+		CCNA_01231	0.58	-1.6
1,359,331	+		CCNA_01231	0.58	-0.9
1,359,331	+		CCNA_01231	0.58	+0.1
1,359,339	-		CCNA_01231	0.59	-1.7
1,359,339	-		CCNA_01231	0.59	-1.6
1,359,340	-		CCNA_01231	0.59	-1.0
1,359,345	-		CCNA_01231	0.60	+0.7
1,359,353	+		CCNA_01231	0.60	+1.2
1,359,361	-		CCNA_01231	0.61	-1.2
1,359,363	+		CCNA_01231	0.61	-0.9
1,359,371	-		CCNA_01231	0.62	-0.0
1,359,376	+		CCNA_01231	0.63	+0.4
1,359,384	-		CCNA_01231	0.64	-2.1
1,359,404	+		CCNA_01231	0.65	-0.9
1,359,404	+		CCNA_01231	0.65	-2.1
1,359,412	-		CCNA_01231	0.66	-1.9
1,359,412	-		CCNA_01231	0.66	+0.2
1,359,433	+		CCNA_01231	0.68	-1.0
1,359,448	+		CCNA_01231	0.70	-0.7
1,359,471	+		CCNA_01231	0.72	-0.5
1,359,471	+		CCNA_01231	0.72	-0.7
1,359,471	+		CCNA_01231	0.72	-1.2
1,359,471	+		CCNA_01231	0.72	-0.5
1,359,471	+		CCNA_01231	0.72	-0.3
1,359,471	+		CCNA_01231	0.72	-1.5
1,359,471	+		CCNA_01231	0.72	-0.6
1,359,477	-		CCNA_01231	0.73	-0.2
1,359,479	-		CCNA_01231	0.73	-0.5
1,359,479	-		CCNA_01231	0.73	+0.3
1,359,479	-		CCNA_01231	0.73	+2.5
1,359,479	-		CCNA_01231	0.73	-2.2
1,359,479	-		CCNA_01231	0.73	-0.4
1,359,500	+		CCNA_01231	0.75	+1.0
1,359,506	-		CCNA_01231	0.76	-0.2
1,359,508	-		CCNA_01231	0.76	-2.6
1,359,508	-		CCNA_01231	0.76	+0.1
1,359,508	-		CCNA_01231	0.76	-1.0
1,359,534	+		CCNA_01231	0.78	-1.2
1,359,539	+		CCNA_01231	0.79	-0.5
1,359,580	-		CCNA_01231	0.83	-2.7
1,359,589	+		CCNA_01231	0.84	-0.2
1,359,601	+		CCNA_01231	0.85	-1.2
1,359,609	-		CCNA_01231	0.86	+1.1
1,359,617	-		CCNA_01231	0.86	+0.4
1,359,629	-		CCNA_01231	0.88	-1.3
1,359,633	+		CCNA_01231	0.88	-1.2
1,359,748	+				-1.4