Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18085

Experiment: R2A with D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.12 mg/ml
4,513,574	+		CA265_RS18080	0.25	+1.4
4,513,609	+		CA265_RS18080	0.35	+1.0
4,513,609	+		CA265_RS18080	0.35	+1.5
4,513,678	-		CA265_RS18080	0.54	+1.2
4,513,695	+		CA265_RS18080	0.59	+1.1
4,513,696	-		CA265_RS18080	0.59	+0.9
4,513,715	+		CA265_RS18080	0.64	+1.8
4,513,717	+		CA265_RS18080	0.65	+0.4
4,513,718	-		CA265_RS18080	0.65	+1.3
4,513,718	-		CA265_RS18080	0.65	+1.3
4,513,727	-		CA265_RS18080	0.68	+1.7
4,513,727	-		CA265_RS18080	0.68	+1.1
4,513,795	-		CA265_RS18080	0.87	+1.1
4,513,815	+				+0.8
4,513,816	-				-0.0
4,513,821	+				+0.6
4,513,822	-				-0.2
4,513,825	-				+1.3
4,513,828	-				-1.4
4,513,851	-				+1.4
4,513,851	-				+0.6
4,513,878	-				+0.2
4,513,879	+				+0.9
4,513,894	+				+1.1
4,513,930	+				+0.4
4,514,048	+				-0.8
4,514,048	+				+0.7
4,514,049	-				+0.7
4,514,049	-				+0.4
4,514,104	-				-0.7
4,514,111	-				-0.4
4,514,134	-		CA265_RS18085	0.14	-0.2
4,514,136	-		CA265_RS18085	0.15	+0.5
4,514,174	-		CA265_RS18085	0.32	-1.1
4,514,222	-		CA265_RS18085	0.53	+0.3
4,514,271	+		CA265_RS18085	0.75	+0.2
4,514,272	-		CA265_RS18085	0.76	+0.1
4,514,272	-		CA265_RS18085	0.76	+1.0
4,514,289	-		CA265_RS18085	0.83	-0.5
4,514,340	-				-0.2
4,514,380	-				+1.0
4,514,396	+				-0.1
4,514,396	+				-0.2
4,514,396	+				+0.9
4,514,397	-				+0.5
4,514,399	-				+0.7
4,514,399	-				-0.1
4,514,410	+				+0.4
4,514,410	+				+0.9
4,514,420	+				+0.3
4,514,484	-				+0.1
4,514,496	+				-0.0
4,514,500	+				-0.9
4,514,501	-				+0.8
4,514,563	+				-0.2
4,514,563	+				+0.1
4,514,566	-				+1.0
4,514,569	+				-0.4
4,514,569	+				-1.6
4,514,571	+				+0.5
4,514,576	-				+0.5
4,514,602	+				-0.2
4,514,603	-				-0.4
4,514,634	+				+0.8
4,514,635	-				+0.4
4,514,712	+				+0.0
4,514,713	-				+0.9
4,514,777	-		CA265_RS18090	0.12	+0.5
4,514,791	+		CA265_RS18090	0.13	+0.9
4,514,791	+		CA265_RS18090	0.13	+0.2
4,514,819	+		CA265_RS18090	0.14	-0.7
4,514,835	+		CA265_RS18090	0.14	+0.2
4,514,859	+		CA265_RS18090	0.15	+0.1
4,514,898	+		CA265_RS18090	0.17	+0.1
4,514,898	+		CA265_RS18090	0.17	-0.3
4,514,899	-				+0.4
4,514,918	+		CA265_RS18090	0.17	+0.1
4,514,919	-		CA265_RS18090	0.17	+0.1
4,514,936	+		CA265_RS18090	0.18	+0.1
4,514,943	+		CA265_RS18090	0.18	-0.7
4,514,943	+		CA265_RS18090	0.18	+0.1
4,515,120	+		CA265_RS18090	0.25	-0.0
4,515,181	+		CA265_RS18090	0.27	+0.2
4,515,181	+		CA265_RS18090	0.27	+0.4
4,515,229	+		CA265_RS18090	0.29	+0.2
4,515,230	-		CA265_RS18090	0.29	-0.7
4,515,230	-		CA265_RS18090	0.29	+0.2
4,515,230	-		CA265_RS18090	0.29	+0.6
4,515,272	+		CA265_RS18090	0.30	+1.5
4,515,314	+		CA265_RS18090	0.32	+0.1