Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15820

Experiment: R2A with D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.12 mg/ml
3,980,259	-		CA265_RS15810	0.24	+1.1
3,980,259	-		CA265_RS15810	0.24	-0.2
3,980,289	-		CA265_RS15810	0.29	+0.2
3,980,381	-		CA265_RS15810	0.43	+1.1
3,980,486	-		CA265_RS15810	0.60	+0.6
3,980,519	-		CA265_RS15810	0.65	+0.9
3,980,585	-		CA265_RS15810	0.75	+0.3
3,980,737	-				+0.3
3,980,761	+				+0.9
3,980,839	+				-1.2
3,980,869	-				-1.0
3,980,923	+		CA265_RS15815	0.21	-0.9
3,980,924	-		CA265_RS15815	0.22	-0.2
3,980,928	+		CA265_RS15815	0.23	+1.0
3,980,998	-		CA265_RS15815	0.41	+2.2
3,981,045	-		CA265_RS15815	0.53	-0.8
3,981,045	-		CA265_RS15815	0.53	-0.0
3,981,084	+		CA265_RS15815	0.63	+0.6
3,981,182	-		CA265_RS15815	0.88	+0.4
3,981,182	-		CA265_RS15815	0.88	+1.1
3,981,236	-				-0.1
3,981,236	-				-1.0
3,981,243	-				+0.4
3,981,244	+				+0.3
3,981,307	-		CA265_RS15820	0.13	-0.0
3,981,307	-		CA265_RS15820	0.13	+0.2
3,981,351	-		CA265_RS15820	0.22	-0.1
3,981,353	-		CA265_RS15820	0.23	+0.1
3,981,394	+		CA265_RS15820	0.31	+2.7
3,981,564	-		CA265_RS15820	0.68	+0.7
3,981,612	-		CA265_RS15820	0.78	-0.2
3,981,612	-		CA265_RS15820	0.78	+1.6
3,981,634	-		CA265_RS15820	0.83	+0.0
3,981,634	-		CA265_RS15820	0.83	+0.6
3,981,673	-				+0.6
3,981,678	-				-0.5
3,981,678	-				-0.5
3,981,678	-				-0.4
3,981,711	-				+1.3
3,981,757	-				+0.5
3,981,813	-				+0.6
3,981,879	+				-0.2
3,981,943	-				+0.3
3,981,943	-				-0.0
3,981,943	-				+0.3
3,981,967	-				-0.2
3,982,013	-		CA265_RS15825	0.12	-0.4
3,982,026	+		CA265_RS15825	0.13	+1.1
3,982,027	-		CA265_RS15825	0.13	+0.2
3,982,043	-		CA265_RS15825	0.14	-0.6
3,982,099	+		CA265_RS15825	0.18	+0.3
3,982,140	+		CA265_RS15825	0.20	-0.4
3,982,141	-		CA265_RS15825	0.20	-0.8
3,982,143	+		CA265_RS15825	0.21	+1.3
3,982,153	+		CA265_RS15825	0.21	-0.4
3,982,154	-		CA265_RS15825	0.21	-0.2
3,982,249	-		CA265_RS15825	0.28	+0.7
3,982,289	-		CA265_RS15825	0.30	-0.7
3,982,301	-		CA265_RS15825	0.31	-1.0
3,982,332	-		CA265_RS15825	0.33	-0.0
3,982,419	-		CA265_RS15825	0.39	-0.3
3,982,430	-		CA265_RS15825	0.40	+0.2
3,982,525	-		CA265_RS15825	0.46	+1.0
3,982,542	+		CA265_RS15825	0.47	-2.2
3,982,553	-		CA265_RS15825	0.48	-0.3
3,982,561	-		CA265_RS15825	0.49	+0.2
3,982,605	-		CA265_RS15825	0.52	+0.3
3,982,605	-		CA265_RS15825	0.52	+0.5
3,982,617	+		CA265_RS15825	0.52	+1.0
3,982,646	-		CA265_RS15825	0.54	+0.1