Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10875

Experiment: R2A with D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.12 mg/ml
2,678,686	-		CA265_RS10865	0.75	-0.4
2,678,725	+		CA265_RS10865	0.82	+0.7
2,678,793	+				-0.4
2,678,948	-				-0.8
2,678,948	-				+0.6
2,678,948	-				-0.0
2,678,958	+				+0.0
2,678,969	-				+0.4
2,678,997	-				+0.7
2,679,143	-				-0.8
2,679,218	-		CA265_RS10870	0.42	-1.1
2,679,284	-		CA265_RS10870	0.55	+0.7
2,679,340	+		CA265_RS10870	0.67	+0.0
2,679,394	+		CA265_RS10870	0.78	-1.5
2,679,396	+		CA265_RS10870	0.78	-0.0
2,679,396	+		CA265_RS10870	0.78	-0.1
2,679,397	-		CA265_RS10870	0.78	+0.2
2,679,503	+				-0.3
2,679,562	-				-0.4
2,679,564	-				-1.2
2,679,586	+				-0.6
2,679,673	+		CA265_RS10875	0.14	+0.4
2,679,691	+		CA265_RS10875	0.23	+0.2
2,679,703	-		CA265_RS10875	0.29	+0.5
2,679,705	+		CA265_RS10875	0.30	+0.0
2,679,706	-		CA265_RS10875	0.30	+0.5
2,679,774	+		CA265_RS10875	0.64	+0.5
2,679,859	-				-0.1
2,679,879	-				-0.3
2,680,527	+				+1.2
2,680,550	-				+0.6
2,680,633	-		CA265_RS10885	0.19	-1.7
2,680,635	+		CA265_RS10885	0.20	+0.3
2,680,648	+		CA265_RS10885	0.22	-0.4
2,680,712	+		CA265_RS10885	0.35	+0.9
2,680,716	+		CA265_RS10885	0.35	+0.9
2,680,716	+		CA265_RS10885	0.35	+0.6
2,680,804	+		CA265_RS10885	0.52	+1.3