Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04395

Experiment: R2A with D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.12 mg/ml
1,053,774	+				-0.6
1,053,825	-				-1.3
1,053,869	-				-1.1
1,053,871	-				+1.1
1,053,905	+				-1.1
1,053,911	+				-0.9
1,053,911	+				-0.3
1,053,912	-				+0.2
1,053,925	+				-0.4
1,053,965	+				+0.0
1,054,069	-				+0.4
1,054,122	-				-2.6
1,054,132	+				+0.6
1,054,132	+				-0.3
1,054,133	-				-1.4
1,054,137	+				+0.7
1,054,201	+				+0.0
1,054,202	-				+0.3
1,054,269	-				+0.9
1,054,334	-		CA265_RS04390	0.11	+0.9
1,054,399	-		CA265_RS04390	0.24	-0.4
1,054,415	+		CA265_RS04390	0.28	+0.1
1,054,415	+		CA265_RS04390	0.28	+0.7
1,054,559	-		CA265_RS04390	0.57	+2.0
1,054,617	-		CA265_RS04390	0.68	+0.5
1,054,617	-		CA265_RS04390	0.68	+0.4
1,054,761	-				-0.5
1,054,798	-				+1.9
1,054,814	+				+1.2
1,054,818	+				+0.6
1,054,824	+				+2.3
1,054,942	+		CA265_RS04395	0.17	+1.9
1,055,018	+		CA265_RS04395	0.24	+1.3
1,055,023	-		CA265_RS04395	0.25	+1.3
1,055,027	+		CA265_RS04395	0.25	+1.6
1,055,028	+		CA265_RS04395	0.25	+1.5
1,055,028	+		CA265_RS04395	0.25	+1.5
1,055,029	-		CA265_RS04395	0.25	+0.9
1,055,253	-		CA265_RS04395	0.47	+1.0
1,055,253	-		CA265_RS04395	0.47	+2.5
1,055,276	-		CA265_RS04395	0.49	+2.3
1,055,348	+		CA265_RS04395	0.56	+1.4
1,055,349	-		CA265_RS04395	0.56	+1.6
1,055,460	+		CA265_RS04395	0.67	+1.7
1,055,460	+		CA265_RS04395	0.67	+0.9
1,055,461	-		CA265_RS04395	0.67	+1.5
1,055,582	-		CA265_RS04395	0.79	+0.9
1,055,606	+		CA265_RS04395	0.81	+0.7
1,055,645	+		CA265_RS04395	0.85	+0.4
1,055,769	+				+1.1
1,055,848	+				+0.6
1,055,848	+				-0.5
1,055,870	+				+1.6
1,055,903	+				-0.1
1,055,906	+				+0.1
1,055,907	-				-0.4
1,055,909	+				+0.0
1,055,910	-				+0.2
1,055,916	+				+1.6
1,055,919	+				+0.9
1,055,921	+				+0.9
1,055,922	-				+1.3
1,055,968	-				+1.6
1,055,971	+		CA265_RS04400	0.10	+1.8
1,056,052	+		CA265_RS04400	0.24	+1.4
1,056,055	+		CA265_RS04400	0.24	+1.5
1,056,056	-		CA265_RS04400	0.25	+0.8
1,056,126	+		CA265_RS04400	0.36	+1.7
1,056,126	+		CA265_RS04400	0.36	+1.0
1,056,150	+		CA265_RS04400	0.40	+1.5
1,056,163	+		CA265_RS04400	0.42	+0.6
1,056,240	-		CA265_RS04400	0.55	+1.4
1,056,290	-		CA265_RS04400	0.63	+2.1
1,056,336	+		CA265_RS04400	0.71	+1.9
1,056,340	+		CA265_RS04400	0.72	+1.4
1,056,341	-		CA265_RS04400	0.72	+0.1
1,056,341	-		CA265_RS04400	0.72	+2.3
1,056,462	-				+1.7
1,056,468	+				+1.5
1,056,522	-				-0.0
1,056,629	+				-0.4
1,056,698	+				-0.4
1,056,698	+				-0.2
1,056,698	+				-0.6
1,056,709	+				-0.3
1,056,718	-				+0.1
1,056,759	+				-1.0
1,056,780	+				-0.1