Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4404 and Ac3H11_4405 are separated by 178 nucleotides Ac3H11_4405 and Ac3H11_4406 overlap by 4 nucleotides Ac3H11_4406 and Ac3H11_4407 overlap by 4 nucleotides
Ac3H11_4404 - Phosphoglycerate kinase (EC 2.7.2.3), at 200,230 to 201,429
_4404
Ac3H11_4405 - Probable transmembrane protein, at 201,608 to 201,946
_4405
Ac3H11_4406 - Branched-chain amino acid transport protein AzlC, at 201,943 to 202,767
_4406
Ac3H11_4407 - Methionyl-tRNA formyltransferase (EC 2.1.2.9), at 202,764 to 203,738
_4407
Position (kb) 201
202
203 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 201.429 kb on + strand at 201.429 kb on + strand at 201.430 kb on - strand at 201.430 kb on - strand at 201.430 kb on - strand at 201.430 kb on - strand at 201.440 kb on + strand at 201.440 kb on + strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.441 kb on - strand at 201.472 kb on + strand at 201.472 kb on + strand at 201.472 kb on + strand at 201.472 kb on + strand at 201.472 kb on + strand at 201.472 kb on + strand at 201.472 kb on + strand at 201.472 kb on + strand at 201.472 kb on + strand at 201.473 kb on - strand at 201.473 kb on - strand at 201.473 kb on - strand at 201.473 kb on - strand at 201.476 kb on - strand at 201.485 kb on - strand at 201.485 kb on - strand at 201.603 kb on + strand at 201.603 kb on + strand at 201.603 kb on + strand at 201.603 kb on + strand at 201.603 kb on + strand at 201.603 kb on + strand at 201.603 kb on + strand at 201.603 kb on + strand at 201.603 kb on + strand at 201.604 kb on - strand at 201.604 kb on - strand at 201.604 kb on - strand at 201.604 kb on - strand at 201.604 kb on - strand at 201.604 kb on - strand at 201.604 kb on - strand at 201.609 kb on + strand at 201.609 kb on + strand at 201.609 kb on + strand at 201.609 kb on + strand at 201.610 kb on - strand at 201.610 kb on - strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.623 kb on + strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.624 kb on - strand at 201.639 kb on + strand at 201.639 kb on + strand at 201.640 kb on - strand at 201.690 kb on + strand, within Ac3H11_4405 at 201.690 kb on + strand, within Ac3H11_4405 at 201.690 kb on + strand, within Ac3H11_4405 at 201.690 kb on + strand, within Ac3H11_4405 at 201.690 kb on + strand, within Ac3H11_4405 at 201.690 kb on + strand, within Ac3H11_4405 at 201.690 kb on + strand, within Ac3H11_4405 at 201.690 kb on + strand, within Ac3H11_4405 at 201.690 kb on + strand, within Ac3H11_4405 at 201.691 kb on - strand, within Ac3H11_4405 at 201.691 kb on - strand, within Ac3H11_4405 at 201.691 kb on - strand, within Ac3H11_4405 at 201.691 kb on - strand, within Ac3H11_4405 at 201.691 kb on - strand, within Ac3H11_4405 at 201.691 kb on - strand, within Ac3H11_4405 at 201.693 kb on + strand, within Ac3H11_4405 at 201.694 kb on - strand, within Ac3H11_4405 at 201.810 kb on + strand, within Ac3H11_4405 at 201.810 kb on + strand, within Ac3H11_4405 at 201.810 kb on + strand, within Ac3H11_4405 at 201.810 kb on + strand, within Ac3H11_4405 at 201.810 kb on + strand, within Ac3H11_4405 at 201.811 kb on - strand, within Ac3H11_4405 at 201.811 kb on - strand, within Ac3H11_4405 at 201.811 kb on - strand, within Ac3H11_4405 at 201.811 kb on - strand, within Ac3H11_4405 at 201.811 kb on - strand, within Ac3H11_4405 at 201.811 kb on - strand, within Ac3H11_4405 at 201.811 kb on - strand, within Ac3H11_4405 at 201.811 kb on - strand, within Ac3H11_4405 at 201.811 kb on - strand, within Ac3H11_4405 at 202.346 kb on + strand, within Ac3H11_4406 at 202.346 kb on + strand, within Ac3H11_4406 at 202.346 kb on + strand, within Ac3H11_4406 at 202.346 kb on + strand, within Ac3H11_4406 at 202.347 kb on - strand, within Ac3H11_4406 at 202.347 kb on - strand, within Ac3H11_4406 at 202.347 kb on - strand, within Ac3H11_4406 at 202.347 kb on - strand, within Ac3H11_4406 at 202.347 kb on - strand, within Ac3H11_4406 at 202.347 kb on - strand, within Ac3H11_4406 at 202.347 kb on - strand, within Ac3H11_4406 at 202.347 kb on - strand, within Ac3H11_4406 at 202.347 kb on - strand, within Ac3H11_4406 at 202.347 kb on - strand, within Ac3H11_4406 at 202.403 kb on + strand, within Ac3H11_4406 at 202.403 kb on + strand, within Ac3H11_4406 at 202.403 kb on + strand, within Ac3H11_4406 at 202.403 kb on + strand, within Ac3H11_4406 at 202.403 kb on + strand, within Ac3H11_4406 at 202.403 kb on + strand, within Ac3H11_4406 at 202.404 kb on - strand, within Ac3H11_4406 at 202.404 kb on - strand, within Ac3H11_4406 at 202.404 kb on - strand, within Ac3H11_4406 at 202.404 kb on - strand, within Ac3H11_4406 at 202.404 kb on - strand, within Ac3H11_4406 at 202.404 kb on - strand, within Ac3H11_4406 at 202.404 kb on - strand, within Ac3H11_4406 at 202.404 kb on - strand, within Ac3H11_4406 at 202.404 kb on - strand, within Ac3H11_4406 at 202.425 kb on - strand, within Ac3H11_4406 at 202.425 kb on - strand, within Ac3H11_4406 at 202.425 kb on - strand, within Ac3H11_4406 at 202.466 kb on + strand, within Ac3H11_4406 at 202.466 kb on + strand, within Ac3H11_4406 at 202.466 kb on + strand, within Ac3H11_4406 at 202.466 kb on + strand, within Ac3H11_4406 at 202.466 kb on + strand, within Ac3H11_4406 at 202.466 kb on + strand, within Ac3H11_4406 at 202.466 kb on + strand, within Ac3H11_4406 at 202.466 kb on + strand, within Ac3H11_4406 at 202.467 kb on - strand, within Ac3H11_4406 at 202.467 kb on - strand, within Ac3H11_4406 at 202.467 kb on - strand, within Ac3H11_4406 at 202.592 kb on + strand, within Ac3H11_4406 at 202.592 kb on + strand, within Ac3H11_4406 at 202.593 kb on - strand, within Ac3H11_4406 at 202.593 kb on - strand, within Ac3H11_4406 at 202.593 kb on - strand, within Ac3H11_4406 at 202.593 kb on - strand, within Ac3H11_4406 at 202.593 kb on - strand, within Ac3H11_4406 at 202.593 kb on - strand, within Ac3H11_4406 at 202.593 kb on - strand, within Ac3H11_4406 at 202.593 kb on - strand, within Ac3H11_4406
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 201,429 + -0.2 201,429 + +0.8 201,430 - +0.0 201,430 - +0.1 201,430 - +0.8 201,430 - -0.2 201,440 + +0.6 201,440 + -0.4 201,441 - +0.5 201,441 - +0.5 201,441 - -0.0 201,441 - -2.1 201,441 - +1.9 201,441 - -0.3 201,441 - -0.1 201,441 - +0.6 201,441 - +0.2 201,441 - +1.4 201,441 - +0.1 201,441 - -1.6 201,441 - -0.5 201,472 + +1.0 201,472 + +0.9 201,472 + +1.3 201,472 + +0.8 201,472 + +0.2 201,472 + -1.5 201,472 + +1.0 201,472 + +0.5 201,472 + -0.7 201,473 - +0.6 201,473 - -0.3 201,473 - +0.0 201,473 - +0.2 201,476 - +0.2 201,485 - +0.0 201,485 - +0.3 201,603 + +2.8 201,603 + +1.3 201,603 + -0.3 201,603 + -1.4 201,603 + -0.5 201,603 + -0.4 201,603 + +0.8 201,603 + +0.5 201,603 + +0.2 201,604 - -0.5 201,604 - -1.9 201,604 - -0.5 201,604 - -0.9 201,604 - -0.1 201,604 - -0.0 201,604 - +1.0 201,609 + +1.2 201,609 + -0.5 201,609 + -0.1 201,609 + +1.5 201,610 - -0.8 201,610 - -1.2 201,623 + -1.2 201,623 + +0.3 201,623 + +0.5 201,623 + +0.3 201,623 + -2.5 201,623 + +0.6 201,623 + +0.4 201,623 + -0.3 201,623 + -0.5 201,623 + -0.2 201,623 + -0.2 201,623 + -1.9 201,623 + -0.4 201,623 + +1.9 201,623 + -1.0 201,623 + -0.0 201,623 + +0.7 201,624 - -1.5 201,624 - +0.3 201,624 - -1.2 201,624 - +0.1 201,624 - +0.1 201,624 - +0.3 201,624 - -0.4 201,624 - +0.5 201,624 - +0.2 201,624 - -0.2 201,624 - -0.5 201,624 - +0.2 201,624 - +0.3 201,624 - -0.2 201,624 - -0.3 201,624 - -1.1 201,624 - -0.2 201,624 - -0.1 201,624 - -1.9 201,624 - -0.4 201,624 - +0.8 201,639 + -2.6 201,639 + -0.9 201,640 - -0.7 201,690 + Ac3H11_4405 0.24 -0.6 201,690 + Ac3H11_4405 0.24 -1.2 201,690 + Ac3H11_4405 0.24 +0.0 201,690 + Ac3H11_4405 0.24 +0.1 201,690 + Ac3H11_4405 0.24 -1.5 201,690 + Ac3H11_4405 0.24 +0.1 201,690 + Ac3H11_4405 0.24 -1.0 201,690 + Ac3H11_4405 0.24 -0.8 201,690 + Ac3H11_4405 0.24 -0.2 201,691 - Ac3H11_4405 0.24 +0.2 201,691 - Ac3H11_4405 0.24 +0.0 201,691 - Ac3H11_4405 0.24 +0.1 201,691 - Ac3H11_4405 0.24 -1.1 201,691 - Ac3H11_4405 0.24 +0.3 201,691 - Ac3H11_4405 0.24 -0.5 201,693 + Ac3H11_4405 0.25 +0.1 201,694 - Ac3H11_4405 0.25 -0.3 201,810 + Ac3H11_4405 0.60 -0.5 201,810 + Ac3H11_4405 0.60 -0.4 201,810 + Ac3H11_4405 0.60 -1.4 201,810 + Ac3H11_4405 0.60 -0.8 201,810 + Ac3H11_4405 0.60 +0.7 201,811 - Ac3H11_4405 0.60 -1.0 201,811 - Ac3H11_4405 0.60 +0.5 201,811 - Ac3H11_4405 0.60 -0.5 201,811 - Ac3H11_4405 0.60 +1.8 201,811 - Ac3H11_4405 0.60 +0.4 201,811 - Ac3H11_4405 0.60 -0.7 201,811 - Ac3H11_4405 0.60 +0.3 201,811 - Ac3H11_4405 0.60 -0.8 201,811 - Ac3H11_4405 0.60 -1.1 202,346 + Ac3H11_4406 0.49 -0.0 202,346 + Ac3H11_4406 0.49 -1.4 202,346 + Ac3H11_4406 0.49 -1.8 202,346 + Ac3H11_4406 0.49 -0.3 202,347 - Ac3H11_4406 0.49 +0.8 202,347 - Ac3H11_4406 0.49 +1.8 202,347 - Ac3H11_4406 0.49 -0.3 202,347 - Ac3H11_4406 0.49 -1.8 202,347 - Ac3H11_4406 0.49 -0.4 202,347 - Ac3H11_4406 0.49 +0.1 202,347 - Ac3H11_4406 0.49 -0.3 202,347 - Ac3H11_4406 0.49 +0.2 202,347 - Ac3H11_4406 0.49 +1.2 202,347 - Ac3H11_4406 0.49 +0.7 202,403 + Ac3H11_4406 0.56 +0.3 202,403 + Ac3H11_4406 0.56 -0.3 202,403 + Ac3H11_4406 0.56 -0.5 202,403 + Ac3H11_4406 0.56 -0.5 202,403 + Ac3H11_4406 0.56 +0.1 202,403 + Ac3H11_4406 0.56 -1.9 202,404 - Ac3H11_4406 0.56 +0.8 202,404 - Ac3H11_4406 0.56 -0.7 202,404 - Ac3H11_4406 0.56 -0.3 202,404 - Ac3H11_4406 0.56 +0.0 202,404 - Ac3H11_4406 0.56 -0.5 202,404 - Ac3H11_4406 0.56 -0.4 202,404 - Ac3H11_4406 0.56 +0.3 202,404 - Ac3H11_4406 0.56 -0.9 202,404 - Ac3H11_4406 0.56 -0.3 202,425 - Ac3H11_4406 0.58 -0.2 202,425 - Ac3H11_4406 0.58 +0.2 202,425 - Ac3H11_4406 0.58 -0.5 202,466 + Ac3H11_4406 0.63 +0.3 202,466 + Ac3H11_4406 0.63 -1.0 202,466 + Ac3H11_4406 0.63 +0.7 202,466 + Ac3H11_4406 0.63 -0.5 202,466 + Ac3H11_4406 0.63 -0.7 202,466 + Ac3H11_4406 0.63 -1.0 202,466 + Ac3H11_4406 0.63 -0.7 202,466 + Ac3H11_4406 0.63 -0.2 202,467 - Ac3H11_4406 0.64 +0.5 202,467 - Ac3H11_4406 0.64 -0.8 202,467 - Ac3H11_4406 0.64 +0.5 202,592 + Ac3H11_4406 0.79 +1.1 202,592 + Ac3H11_4406 0.79 -0.4 202,593 - Ac3H11_4406 0.79 -0.2 202,593 - Ac3H11_4406 0.79 +2.8 202,593 - Ac3H11_4406 0.79 +0.1 202,593 - Ac3H11_4406 0.79 -0.2 202,593 - Ac3H11_4406 0.79 +0.6 202,593 - Ac3H11_4406 0.79 -0.4 202,593 - Ac3H11_4406 0.79 -0.5 202,593 - Ac3H11_4406 0.79 -0.2
Or see this region's nucleotide sequence